metaSNV: A tool for metagenomic strain level analysis

We present metaSNV, a tool for single nucleotide variant (SNV) analysis in metagenomic samples, capable of comparing populations of thousands of bacterial and archaeal species. The tool uses as input nucleotide sequence alignments to reference genomes in standard SAM/BAM format, performs SNV calling...

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Detalles Bibliográficos
Autores principales: Costea, Paul Igor, Munch, Robin, Coelho, Luis Pedro, Paoli, Lucas, Sunagawa, Shinichi, Bork, Peer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533426/
https://www.ncbi.nlm.nih.gov/pubmed/28753663
http://dx.doi.org/10.1371/journal.pone.0182392

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5533426/
https://www.ncbi.nlm.nih.gov/pubmed/28753663
http://dx.doi.org/10.1371/journal.pone.0182392

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