De Novo Assembly of Complete Chloroplast Genomes from Non-model Species Based on a K-mer Frequency-Based Selection of Chloroplast Reads from Total DNA Sequences

Whole Genome Shotgun (WGS) sequences of plant species often contain an abundance of reads that are derived from the chloroplast genome. Up to now these reads have generally been identified and assembled into chloroplast genomes based on homology to chloroplasts from related species. This re-sequenci...

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Detalles Bibliográficos
Autores principales: Izan, Shairul, Esselink, Danny, Visser, Richard G. F., Smulders, Marinus J. M., Borm, Theo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Plant Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5539191/
https://www.ncbi.nlm.nih.gov/pubmed/28824658
http://dx.doi.org/10.3389/fpls.2017.01271

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5539191/
https://www.ncbi.nlm.nih.gov/pubmed/28824658
http://dx.doi.org/10.3389/fpls.2017.01271

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