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Genetically improved BarraCUDA

BACKGROUND: BarraCUDA is an open source C program which uses the BWA algorithm in parallel with nVidia CUDA to align short next generation DNA sequences against a reference genome. Recently its source code was optimised using “Genetic Improvement”. RESULTS: The genetically improved (GI) code is up t...

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Detalles Bibliográficos
Autores principales: Langdon, W. B., Lam, Brian Yee Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5541657/
https://www.ncbi.nlm.nih.gov/pubmed/28785314
http://dx.doi.org/10.1186/s13040-017-0149-1