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Using the MWC model to describe heterotropic interactions in hemoglobin

Hemoglobin is a classical model allosteric protein. Research on hemoglobin parallels the development of key cooperativity and allostery concepts, such as the ‘all-or-none’ Hill formalism, the stepwise Adair binding formulation and the concerted Monod-Wymann-Changuex (MWC) allosteric model. While it...

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Detalles Bibliográficos
Autores principales: Rapp, Olga, Yifrach, Ofer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5549968/
https://www.ncbi.nlm.nih.gov/pubmed/28793329
http://dx.doi.org/10.1371/journal.pone.0182871
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author Rapp, Olga
Yifrach, Ofer
author_facet Rapp, Olga
Yifrach, Ofer
author_sort Rapp, Olga
collection PubMed
description Hemoglobin is a classical model allosteric protein. Research on hemoglobin parallels the development of key cooperativity and allostery concepts, such as the ‘all-or-none’ Hill formalism, the stepwise Adair binding formulation and the concerted Monod-Wymann-Changuex (MWC) allosteric model. While it is clear that the MWC model adequately describes the cooperative binding of oxygen to hemoglobin, rationalizing the effects of H(+), CO(2) or organophosphate ligands on hemoglobin-oxygen saturation using the same model remains controversial. According to the MWC model, allosteric ligands exert their effect on protein function by modulating the quaternary conformational transition of the protein. However, data fitting analysis of hemoglobin oxygen saturation curves in the presence or absence of inhibitory ligands persistently revealed effects on both relative oxygen affinity (c) and conformational changes (L), elementary MWC parameters. The recent realization that data fitting analysis using the traditional MWC model equation may not provide reliable estimates for L and c thus calls for a re-examination of previous data using alternative fitting strategies. In the current manuscript, we present two simple strategies for obtaining reliable estimates for MWC mechanistic parameters of hemoglobin steady-state saturation curves in cases of both evolutionary and physiological variations. Our results suggest that the simple MWC model provides a reasonable description that can also account for heterotropic interactions in hemoglobin. The results, moreover, offer a general roadmap for successful data fitting analysis using the MWC model.
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spelling pubmed-55499682017-08-15 Using the MWC model to describe heterotropic interactions in hemoglobin Rapp, Olga Yifrach, Ofer PLoS One Research Article Hemoglobin is a classical model allosteric protein. Research on hemoglobin parallels the development of key cooperativity and allostery concepts, such as the ‘all-or-none’ Hill formalism, the stepwise Adair binding formulation and the concerted Monod-Wymann-Changuex (MWC) allosteric model. While it is clear that the MWC model adequately describes the cooperative binding of oxygen to hemoglobin, rationalizing the effects of H(+), CO(2) or organophosphate ligands on hemoglobin-oxygen saturation using the same model remains controversial. According to the MWC model, allosteric ligands exert their effect on protein function by modulating the quaternary conformational transition of the protein. However, data fitting analysis of hemoglobin oxygen saturation curves in the presence or absence of inhibitory ligands persistently revealed effects on both relative oxygen affinity (c) and conformational changes (L), elementary MWC parameters. The recent realization that data fitting analysis using the traditional MWC model equation may not provide reliable estimates for L and c thus calls for a re-examination of previous data using alternative fitting strategies. In the current manuscript, we present two simple strategies for obtaining reliable estimates for MWC mechanistic parameters of hemoglobin steady-state saturation curves in cases of both evolutionary and physiological variations. Our results suggest that the simple MWC model provides a reasonable description that can also account for heterotropic interactions in hemoglobin. The results, moreover, offer a general roadmap for successful data fitting analysis using the MWC model. Public Library of Science 2017-08-09 /pmc/articles/PMC5549968/ /pubmed/28793329 http://dx.doi.org/10.1371/journal.pone.0182871 Text en © 2017 Rapp, Yifrach http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Rapp, Olga
Yifrach, Ofer
Using the MWC model to describe heterotropic interactions in hemoglobin
title Using the MWC model to describe heterotropic interactions in hemoglobin
title_full Using the MWC model to describe heterotropic interactions in hemoglobin
title_fullStr Using the MWC model to describe heterotropic interactions in hemoglobin
title_full_unstemmed Using the MWC model to describe heterotropic interactions in hemoglobin
title_short Using the MWC model to describe heterotropic interactions in hemoglobin
title_sort using the mwc model to describe heterotropic interactions in hemoglobin
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5549968/
https://www.ncbi.nlm.nih.gov/pubmed/28793329
http://dx.doi.org/10.1371/journal.pone.0182871
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