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Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device

Epidermal growth factor receptor (EGFR) mutations predict better outcomes with EGFR tyrosine kinase inhibitors in patients with non-small cell lung cancer (NSCLC). Most common activating mutations include in-frame deletion in exon 19 and L858R substitution in exon 21, which account for >90% of al...

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Autores principales: Li, Xian-Ying, Zhang, Chao, Zhang, Qin-Lu, Zhu, Juan-Li, Liu, Qian, Chen, Ming-Wei, Yang, Xue-Min, Hui, Wen-Li, Cui, Ya-Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566435/
https://www.ncbi.nlm.nih.gov/pubmed/28827701
http://dx.doi.org/10.1038/s41598-017-08210-8
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author Li, Xian-Ying
Zhang, Chao
Zhang, Qin-Lu
Zhu, Juan-Li
Liu, Qian
Chen, Ming-Wei
Yang, Xue-Min
Hui, Wen-Li
Cui, Ya-Li
author_facet Li, Xian-Ying
Zhang, Chao
Zhang, Qin-Lu
Zhu, Juan-Li
Liu, Qian
Chen, Ming-Wei
Yang, Xue-Min
Hui, Wen-Li
Cui, Ya-Li
author_sort Li, Xian-Ying
collection PubMed
description Epidermal growth factor receptor (EGFR) mutations predict better outcomes with EGFR tyrosine kinase inhibitors in patients with non-small cell lung cancer (NSCLC). Most common activating mutations include in-frame deletion in exon 19 and L858R substitution in exon 21, which account for >90% of all EGFR mutations in NSCLC. In this study, a PCR-GoldMag lateral flow assay (PCR-GoldMag LFA) was developed for the visual detection of delE746-A750 and L858R of EGFR mutations. Forty formalin-fixed paraffin-embedded (FFPE) tissue samples of NSCLC patients were analyzed using PCR-GoldMag LFA system and verified by direct sequencing and TaqMan-PCR detection methods. Results showed that EGFR mutations were detected in 34 cases among the 40 samples (85%) by PCR-GoldMag LFA method. Among the 34 cases, 5 cases were simultaneously detected with delE746-A750 in exon 19 and L858R mutation in exon 21. Compared with sequencing, only 4 samples were detected as delE746-A750, which revealed higher sensitivity of PCR-GoldMag LFA detection method than direct sequencing. TaqMan-PCR method verified the L858R mutation and was in 100% agreement with our method. These results indicated that our method has obvious advantages to analyze clinical samples and offers a more sensitive alternative to direct sequencing for the detection of EGFR mutations.
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spelling pubmed-55664352017-08-23 Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device Li, Xian-Ying Zhang, Chao Zhang, Qin-Lu Zhu, Juan-Li Liu, Qian Chen, Ming-Wei Yang, Xue-Min Hui, Wen-Li Cui, Ya-Li Sci Rep Article Epidermal growth factor receptor (EGFR) mutations predict better outcomes with EGFR tyrosine kinase inhibitors in patients with non-small cell lung cancer (NSCLC). Most common activating mutations include in-frame deletion in exon 19 and L858R substitution in exon 21, which account for >90% of all EGFR mutations in NSCLC. In this study, a PCR-GoldMag lateral flow assay (PCR-GoldMag LFA) was developed for the visual detection of delE746-A750 and L858R of EGFR mutations. Forty formalin-fixed paraffin-embedded (FFPE) tissue samples of NSCLC patients were analyzed using PCR-GoldMag LFA system and verified by direct sequencing and TaqMan-PCR detection methods. Results showed that EGFR mutations were detected in 34 cases among the 40 samples (85%) by PCR-GoldMag LFA method. Among the 34 cases, 5 cases were simultaneously detected with delE746-A750 in exon 19 and L858R mutation in exon 21. Compared with sequencing, only 4 samples were detected as delE746-A750, which revealed higher sensitivity of PCR-GoldMag LFA detection method than direct sequencing. TaqMan-PCR method verified the L858R mutation and was in 100% agreement with our method. These results indicated that our method has obvious advantages to analyze clinical samples and offers a more sensitive alternative to direct sequencing for the detection of EGFR mutations. Nature Publishing Group UK 2017-08-21 /pmc/articles/PMC5566435/ /pubmed/28827701 http://dx.doi.org/10.1038/s41598-017-08210-8 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Li, Xian-Ying
Zhang, Chao
Zhang, Qin-Lu
Zhu, Juan-Li
Liu, Qian
Chen, Ming-Wei
Yang, Xue-Min
Hui, Wen-Li
Cui, Ya-Li
Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title_full Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title_fullStr Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title_full_unstemmed Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title_short Sensitive genotyping of mutations in the EGFR gene from NSCLC patients using PCR-GoldMag lateral flow device
title_sort sensitive genotyping of mutations in the egfr gene from nsclc patients using pcr-goldmag lateral flow device
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5566435/
https://www.ncbi.nlm.nih.gov/pubmed/28827701
http://dx.doi.org/10.1038/s41598-017-08210-8
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