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Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme
Although catalytic mechanisms in natural enzymes are well understood, achieving the diverse palette of reaction chemistries in re-engineered native proteins has proved challenging. Wholesale modification of natural enzymes is potentially compromised by their intrinsic complexity, which often obscure...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572459/ https://www.ncbi.nlm.nih.gov/pubmed/28842561 http://dx.doi.org/10.1038/s41467-017-00541-4 |
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author | Watkins, Daniel W. Jenkins, Jonathan M. X. Grayson, Katie J. Wood, Nicola Steventon, Jack W. Le Vay, Kristian K. Goodwin, Matthew I. Mullen, Anna S. Bailey, Henry J. Crump, Matthew P. MacMillan, Fraser Mulholland, Adrian J. Cameron, Gus Sessions, Richard B. Mann, Stephen Anderson, J. L. Ross |
author_facet | Watkins, Daniel W. Jenkins, Jonathan M. X. Grayson, Katie J. Wood, Nicola Steventon, Jack W. Le Vay, Kristian K. Goodwin, Matthew I. Mullen, Anna S. Bailey, Henry J. Crump, Matthew P. MacMillan, Fraser Mulholland, Adrian J. Cameron, Gus Sessions, Richard B. Mann, Stephen Anderson, J. L. Ross |
author_sort | Watkins, Daniel W. |
collection | PubMed |
description | Although catalytic mechanisms in natural enzymes are well understood, achieving the diverse palette of reaction chemistries in re-engineered native proteins has proved challenging. Wholesale modification of natural enzymes is potentially compromised by their intrinsic complexity, which often obscures the underlying principles governing biocatalytic efficiency. The maquette approach can circumvent this complexity by combining a robust de novo designed chassis with a design process that avoids atomistic mimicry of natural proteins. Here, we apply this method to the construction of a highly efficient, promiscuous, and thermostable artificial enzyme that catalyzes a diverse array of substrate oxidations coupled to the reduction of H(2)O(2). The maquette exhibits kinetics that match and even surpass those of certain natural peroxidases, retains its activity at elevated temperature and in the presence of organic solvents, and provides a simple platform for interrogating catalytic intermediates common to natural heme-containing enzymes. |
format | Online Article Text |
id | pubmed-5572459 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55724592017-09-01 Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme Watkins, Daniel W. Jenkins, Jonathan M. X. Grayson, Katie J. Wood, Nicola Steventon, Jack W. Le Vay, Kristian K. Goodwin, Matthew I. Mullen, Anna S. Bailey, Henry J. Crump, Matthew P. MacMillan, Fraser Mulholland, Adrian J. Cameron, Gus Sessions, Richard B. Mann, Stephen Anderson, J. L. Ross Nat Commun Article Although catalytic mechanisms in natural enzymes are well understood, achieving the diverse palette of reaction chemistries in re-engineered native proteins has proved challenging. Wholesale modification of natural enzymes is potentially compromised by their intrinsic complexity, which often obscures the underlying principles governing biocatalytic efficiency. The maquette approach can circumvent this complexity by combining a robust de novo designed chassis with a design process that avoids atomistic mimicry of natural proteins. Here, we apply this method to the construction of a highly efficient, promiscuous, and thermostable artificial enzyme that catalyzes a diverse array of substrate oxidations coupled to the reduction of H(2)O(2). The maquette exhibits kinetics that match and even surpass those of certain natural peroxidases, retains its activity at elevated temperature and in the presence of organic solvents, and provides a simple platform for interrogating catalytic intermediates common to natural heme-containing enzymes. Nature Publishing Group UK 2017-08-25 /pmc/articles/PMC5572459/ /pubmed/28842561 http://dx.doi.org/10.1038/s41467-017-00541-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Watkins, Daniel W. Jenkins, Jonathan M. X. Grayson, Katie J. Wood, Nicola Steventon, Jack W. Le Vay, Kristian K. Goodwin, Matthew I. Mullen, Anna S. Bailey, Henry J. Crump, Matthew P. MacMillan, Fraser Mulholland, Adrian J. Cameron, Gus Sessions, Richard B. Mann, Stephen Anderson, J. L. Ross Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title | Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title_full | Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title_fullStr | Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title_full_unstemmed | Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title_short | Construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
title_sort | construction and in vivo assembly of a catalytically proficient and hyperthermostable de novo enzyme |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572459/ https://www.ncbi.nlm.nih.gov/pubmed/28842561 http://dx.doi.org/10.1038/s41467-017-00541-4 |
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