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Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins
Antifreeze Proteins (AFPs) inhibit the growth of an ice crystal by binding to it. The detailed binding mechanism is, however, still not fully understood. We investigated three AFPs using Molecular Dynamics simulations in combination with Grid Inhomogeneous Solvation Theory, exploring their hydration...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605524/ https://www.ncbi.nlm.nih.gov/pubmed/28928396 http://dx.doi.org/10.1038/s41598-017-11982-8 |
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author | Schauperl, Michael Podewitz, Maren Ortner, Teresa S. Waibl, Franz Thoeny, Alexander Loerting, Thomas Liedl, Klaus R. |
author_facet | Schauperl, Michael Podewitz, Maren Ortner, Teresa S. Waibl, Franz Thoeny, Alexander Loerting, Thomas Liedl, Klaus R. |
author_sort | Schauperl, Michael |
collection | PubMed |
description | Antifreeze Proteins (AFPs) inhibit the growth of an ice crystal by binding to it. The detailed binding mechanism is, however, still not fully understood. We investigated three AFPs using Molecular Dynamics simulations in combination with Grid Inhomogeneous Solvation Theory, exploring their hydration thermodynamics. The observed enthalpic and entropic differences between the ice-binding sites and the inactive surface reveal key properties essential for proteins in order to bind ice: While entropic contributions are similar for all sites, the enthalpic gain for all ice-binding sites is lower than for the rest of the protein surface. In contrast to most of the recently published studies, our analyses show that enthalpic interactions are as important as an ice-like pre-ordering. Based on these observations, we propose a new, thermodynamically more refined mechanism of the ice recognition process showing that the appropriate balance between entropy and enthalpy facilitates ice-binding of proteins. Especially, high enthalpic interactions between the protein surface and water can hinder the ice-binding activity. |
format | Online Article Text |
id | pubmed-5605524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56055242017-09-20 Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins Schauperl, Michael Podewitz, Maren Ortner, Teresa S. Waibl, Franz Thoeny, Alexander Loerting, Thomas Liedl, Klaus R. Sci Rep Article Antifreeze Proteins (AFPs) inhibit the growth of an ice crystal by binding to it. The detailed binding mechanism is, however, still not fully understood. We investigated three AFPs using Molecular Dynamics simulations in combination with Grid Inhomogeneous Solvation Theory, exploring their hydration thermodynamics. The observed enthalpic and entropic differences between the ice-binding sites and the inactive surface reveal key properties essential for proteins in order to bind ice: While entropic contributions are similar for all sites, the enthalpic gain for all ice-binding sites is lower than for the rest of the protein surface. In contrast to most of the recently published studies, our analyses show that enthalpic interactions are as important as an ice-like pre-ordering. Based on these observations, we propose a new, thermodynamically more refined mechanism of the ice recognition process showing that the appropriate balance between entropy and enthalpy facilitates ice-binding of proteins. Especially, high enthalpic interactions between the protein surface and water can hinder the ice-binding activity. Nature Publishing Group UK 2017-09-19 /pmc/articles/PMC5605524/ /pubmed/28928396 http://dx.doi.org/10.1038/s41598-017-11982-8 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Schauperl, Michael Podewitz, Maren Ortner, Teresa S. Waibl, Franz Thoeny, Alexander Loerting, Thomas Liedl, Klaus R. Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title | Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title_full | Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title_fullStr | Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title_full_unstemmed | Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title_short | Balance between hydration enthalpy and entropy is important for ice binding surfaces in Antifreeze Proteins |
title_sort | balance between hydration enthalpy and entropy is important for ice binding surfaces in antifreeze proteins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605524/ https://www.ncbi.nlm.nih.gov/pubmed/28928396 http://dx.doi.org/10.1038/s41598-017-11982-8 |
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