DESMAN: a new tool for de novo extraction of strains from metagenomes

We introduce DESMAN for De novo Extraction of Strains from Metagenomes. Large multi-sample metagenomes are being generated but strain variation results in fragmentary co-assemblies. Current algorithms can bin contigs into metagenome-assembled genomes but are unable to resolve strain-level variation....

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Detalles Bibliográficos
Autores principales: Quince, Christopher, Delmont, Tom O., Raguideau, Sébastien, Alneberg, Johannes, Darling, Aaron E., Collins, Gavin, Eren, A. Murat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5607848/
https://www.ncbi.nlm.nih.gov/pubmed/28934976
http://dx.doi.org/10.1186/s13059-017-1309-9

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5607848/
https://www.ncbi.nlm.nih.gov/pubmed/28934976
http://dx.doi.org/10.1186/s13059-017-1309-9

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