Optimal choice of word length when comparing two Markov sequences using a χ(2)-statistic

BACKGROUND: Alignment-free sequence comparison using counts of word patterns (grams, k-tuples) has become an active research topic due to the large amount of sequence data from the new sequencing technologies. Genome sequences are frequently modelled by Markov chains and the likelihood ratio test or...

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Detalles Bibliográficos
Autores principales: Bai, Xin, Tang, Kujin, Ren, Jie, Waterman, Michael, Sun, Fengzhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5629589/
https://www.ncbi.nlm.nih.gov/pubmed/28984181
http://dx.doi.org/10.1186/s12864-017-4020-z

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5629589/
https://www.ncbi.nlm.nih.gov/pubmed/28984181
http://dx.doi.org/10.1186/s12864-017-4020-z

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