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Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
As sequencing technologies have evolved, the tools to analyze these sequences have made similar advances. However, for multi-species samples, we observed important and adverse differences in alignment specificity and computation time for bwa- mem (Burrows–Wheeler aligner-maximum exact matches) relat...
Autores principales: | Robinson, Kelly M., Hawkins, Aziah S., Santana-Cruz, Ivette, Adkins, Ricky S., Shetty, Amol C., Nagaraj, Sushma, Sadzewicz, Lisa, Tallon, Luke J., Rasko, David A., Fraser, Claire M., Mahurkar, Anup, Silva, Joana C., Dunning Hotopp, Julie C. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5643015/ https://www.ncbi.nlm.nih.gov/pubmed/29114401 http://dx.doi.org/10.1099/mgen.0.000122 |
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