Cargando…

Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing

With the rapidly increasing volume of deep sequencing data, more efficient algorithms and data structures are needed. Minimizers are a central recent paradigm that has improved various sequence analysis tasks, including hashing for faster read overlap detection, sparse suffix arrays for creating sma...

Descripción completa

Detalles Bibliográficos
Autores principales: Orenstein, Yaron, Pellow, David, Marçais, Guillaume, Shamir, Ron, Kingsford, Carl
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645146/
https://www.ncbi.nlm.nih.gov/pubmed/28968408
http://dx.doi.org/10.1371/journal.pcbi.1005777