Detection of bacterial contaminants and hybrid sequences in the genome of the kelp Saccharina japonica using Taxoblast

Modern genome sequencing strategies are highly sensitive to contamination making the detection of foreign DNA sequences an important part of analysis pipelines. Here we use Taxoblast, a simple pipeline with a graphical user interface, for the post-assembly detection of contaminating sequences in the...

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Detalles Bibliográficos
Autores principales: Dittami, Simon M., Corre, Erwan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2017
Materias:
Bioinformatics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695246/
https://www.ncbi.nlm.nih.gov/pubmed/29158994
http://dx.doi.org/10.7717/peerj.4073

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695246/
https://www.ncbi.nlm.nih.gov/pubmed/29158994
http://dx.doi.org/10.7717/peerj.4073

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