Cargando…
Detection of bacterial contaminants and hybrid sequences in the genome of the kelp Saccharina japonica using Taxoblast
Modern genome sequencing strategies are highly sensitive to contamination making the detection of foreign DNA sequences an important part of analysis pipelines. Here we use Taxoblast, a simple pipeline with a graphical user interface, for the post-assembly detection of contaminating sequences in the...
Autores principales: | Dittami, Simon M., Corre, Erwan |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5695246/ https://www.ncbi.nlm.nih.gov/pubmed/29158994 http://dx.doi.org/10.7717/peerj.4073 |
Ejemplares similares
-
Cloning and characterization of nitrate reductase gene in kelp Saccharina japonica (Laminariales, Phaeophyta)
por: Wang, Zhenghua, et al.
Publicado: (2023) -
Improving seedless kelp (Saccharina japonica) during its domestication by hybridizing gametophytes and seedling-raising from sporophytes
por: Li, Xiaojie, et al.
Publicado: (2016) -
Is geographical variation driving the transcriptomic responses to multiple stressors in the kelp Saccharina latissima?
por: Machado Monteiro, Cátia Marina, et al.
Publicado: (2019) -
Phylogeographic data revealed shallow genetic structure in the kelp Saccharina japonica (Laminariales, Phaeophyta)
por: Zhang, Jie, et al.
Publicado: (2015) -
Phylogeographic diversification and postglacial range dynamics shed light on the conservation of the kelp Saccharina japonica
por: Zhang, Jie, et al.
Publicado: (2019)