Cargando…
Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
Recent advances have made it possible to analyze high-throughput marker-gene sequencing data without resorting to the customary construction of molecular operational taxonomic units (OTUs): clusters of sequencing reads that differ by less than a fixed dissimilarity threshold. New methods control err...
Autores principales: | Callahan, Benjamin J, McMurdie, Paul J, Holmes, Susan P |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702726/ https://www.ncbi.nlm.nih.gov/pubmed/28731476 http://dx.doi.org/10.1038/ismej.2017.119 |
Ejemplares similares
-
Broadscale Ecological Patterns Are Robust to Use of Exact Sequence Variants versus Operational Taxonomic Units
por: Glassman, Sydney I., et al.
Publicado: (2018) -
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
por: McMurdie, Paul J., et al.
Publicado: (2013) -
Shiny-phyloseq: Web application for interactive microbiome analysis with provenance tracking
por: McMurdie, Paul J., et al.
Publicado: (2015) -
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
por: McMurdie, Paul J., et al.
Publicado: (2014) -
Bioconductor Workflow for Microbiome Data Analysis: from raw reads to community analyses
por: Callahan, Ben J., et al.
Publicado: (2016)