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An efficient error correction algorithm using FM-index

BACKGROUND: High-throughput sequencing offers higher throughput and lower cost for sequencing a genome. However, sequencing errors, including mismatches and indels, may be produced during sequencing. Because, errors may reduce the accuracy of subsequent de novo assembly, error correction is necessar...

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Detalles Bibliográficos
Autores principales: Huang, Yao-Ting, Huang, Yu-Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5704532/
https://www.ncbi.nlm.nih.gov/pubmed/29179672
http://dx.doi.org/10.1186/s12859-017-1940-1