Cargando…
An efficient error correction algorithm using FM-index
BACKGROUND: High-throughput sequencing offers higher throughput and lower cost for sequencing a genome. However, sequencing errors, including mismatches and indels, may be produced during sequencing. Because, errors may reduce the accuracy of subsequent de novo assembly, error correction is necessar...
Autores principales: | Huang, Yao-Ting, Huang, Yu-Wen |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5704532/ https://www.ncbi.nlm.nih.gov/pubmed/29179672 http://dx.doi.org/10.1186/s12859-017-1940-1 |
Ejemplares similares
-
FMLRC: Hybrid long read error correction using an FM-index
por: Wang, Jeremy R., et al.
Publicado: (2018) -
PFP-FM: An Accelerated FM-index
por: Hong, Aaron, et al.
Publicado: (2023) -
Efficient construction of an assembly string graph using the FM-index
por: Simpson, Jared T., et al.
Publicado: (2010) -
NoDe: a fast error-correction algorithm for pyrosequencing amplicon reads
por: Mysara, Mohamed, et al.
Publicado: (2015) -
Family reunion via error correction: an efficient analysis of duplex sequencing data
por: Stoler, Nicholas, et al.
Publicado: (2020)