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Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse

How press disturbance (long-term) influences the phylogenetic turnover of soil microbial communities responding to pulse disturbances (short-term) is not fully known. Understanding the complex connections between the history of environmental conditions, assembly processes and microbial community dyn...

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Autores principales: Liu, Chi, Yao, Minjie, Stegen, James C., Rui, Junpeng, Li, Jiabao, Li, Xiangzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727477/
https://www.ncbi.nlm.nih.gov/pubmed/29235487
http://dx.doi.org/10.1038/s41598-017-17736-w
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author Liu, Chi
Yao, Minjie
Stegen, James C.
Rui, Junpeng
Li, Jiabao
Li, Xiangzhen
author_facet Liu, Chi
Yao, Minjie
Stegen, James C.
Rui, Junpeng
Li, Jiabao
Li, Xiangzhen
author_sort Liu, Chi
collection PubMed
description How press disturbance (long-term) influences the phylogenetic turnover of soil microbial communities responding to pulse disturbances (short-term) is not fully known. Understanding the complex connections between the history of environmental conditions, assembly processes and microbial community dynamics is necessary to predict microbial response to perturbation. We started by investigating phylogenetic spatial turnover (based on DNA) of soil prokaryotic communities after long-term nitrogen (N) deposition and temporal turnover (based on RNA) of communities responding to pulse by conducting short-term rewetting experiments. The results showed that moderate N addition increased ecological stochasticity and phylogenetic diversity. In contrast, high N addition slightly increased homogeneous selection and decreased phylogenetic diversity. Examining the system with higher phylogenetic resolution revealed a moderate contribution of variable selection across the whole N gradient. The moisture pulse experiment showed that high N soils had higher rates of phylogenetic turnover across short phylogenetic distances and significant changes in community compositions through time. Long-term N input history influenced spatial turnover of microbial communities, but the dominant community assembly mechanisms differed across different N deposition gradients. We further revealed an interaction between press and pulse disturbances whereby deterministic processes were particularly important following pulse disturbances in high N soils.
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spelling pubmed-57274772017-12-13 Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse Liu, Chi Yao, Minjie Stegen, James C. Rui, Junpeng Li, Jiabao Li, Xiangzhen Sci Rep Article How press disturbance (long-term) influences the phylogenetic turnover of soil microbial communities responding to pulse disturbances (short-term) is not fully known. Understanding the complex connections between the history of environmental conditions, assembly processes and microbial community dynamics is necessary to predict microbial response to perturbation. We started by investigating phylogenetic spatial turnover (based on DNA) of soil prokaryotic communities after long-term nitrogen (N) deposition and temporal turnover (based on RNA) of communities responding to pulse by conducting short-term rewetting experiments. The results showed that moderate N addition increased ecological stochasticity and phylogenetic diversity. In contrast, high N addition slightly increased homogeneous selection and decreased phylogenetic diversity. Examining the system with higher phylogenetic resolution revealed a moderate contribution of variable selection across the whole N gradient. The moisture pulse experiment showed that high N soils had higher rates of phylogenetic turnover across short phylogenetic distances and significant changes in community compositions through time. Long-term N input history influenced spatial turnover of microbial communities, but the dominant community assembly mechanisms differed across different N deposition gradients. We further revealed an interaction between press and pulse disturbances whereby deterministic processes were particularly important following pulse disturbances in high N soils. Nature Publishing Group UK 2017-12-13 /pmc/articles/PMC5727477/ /pubmed/29235487 http://dx.doi.org/10.1038/s41598-017-17736-w Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Liu, Chi
Yao, Minjie
Stegen, James C.
Rui, Junpeng
Li, Jiabao
Li, Xiangzhen
Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title_full Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title_fullStr Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title_full_unstemmed Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title_short Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
title_sort long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5727477/
https://www.ncbi.nlm.nih.gov/pubmed/29235487
http://dx.doi.org/10.1038/s41598-017-17736-w
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