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Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic f...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738083/ https://www.ncbi.nlm.nih.gov/pubmed/29261779 http://dx.doi.org/10.1371/journal.pone.0190061 |
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author | Conrad, Douglas J. Bailey, Barbara A. Hardie, Jon A. Bakke, Per S. Eagan, Tomas M. L. Aarli, Bernt B. |
author_facet | Conrad, Douglas J. Bailey, Barbara A. Hardie, Jon A. Bakke, Per S. Eagan, Tomas M. L. Aarli, Bernt B. |
author_sort | Conrad, Douglas J. |
collection | PubMed |
description | RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) populations. METHODS: Individual FEV(1) data from CF and COPD subjects were modeled by estimating median regression splines and their predicted first and second derivatives. Classes were created from variables that capture the dynamics of these curves in both cohorts. RESULTS: Nine FEV(1) dynamic variables were identified from the splines and their predicted derivatives in individuals with CF (n = 177) and COPD (n = 374). Three FEV(1) dynamic classes (i.e. stable, intermediate and hypervariable) were generated and described using these variables from both cohorts. In the CF cohort, the FEV(1) hypervariable class (HV) was associated with a clinically unstable, female-dominated phenotypes while stable FEV(1) class (S) individuals were highly associated with the male-dominated milder clinical phenotype. In the COPD cohort, associations were found between the FEV(1) dynamic classes, the COPD GOLD grades, with exacerbation frequency and symptoms. CONCLUSION: Nonlinear modeling of FEV(1) with splines provides new insights and is useful in characterizing CF and COPD clinical phenotypes. |
format | Online Article Text |
id | pubmed-5738083 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-57380832017-12-29 Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients Conrad, Douglas J. Bailey, Barbara A. Hardie, Jon A. Bakke, Per S. Eagan, Tomas M. L. Aarli, Bernt B. PLoS One Research Article RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) populations. METHODS: Individual FEV(1) data from CF and COPD subjects were modeled by estimating median regression splines and their predicted first and second derivatives. Classes were created from variables that capture the dynamics of these curves in both cohorts. RESULTS: Nine FEV(1) dynamic variables were identified from the splines and their predicted derivatives in individuals with CF (n = 177) and COPD (n = 374). Three FEV(1) dynamic classes (i.e. stable, intermediate and hypervariable) were generated and described using these variables from both cohorts. In the CF cohort, the FEV(1) hypervariable class (HV) was associated with a clinically unstable, female-dominated phenotypes while stable FEV(1) class (S) individuals were highly associated with the male-dominated milder clinical phenotype. In the COPD cohort, associations were found between the FEV(1) dynamic classes, the COPD GOLD grades, with exacerbation frequency and symptoms. CONCLUSION: Nonlinear modeling of FEV(1) with splines provides new insights and is useful in characterizing CF and COPD clinical phenotypes. Public Library of Science 2017-12-20 /pmc/articles/PMC5738083/ /pubmed/29261779 http://dx.doi.org/10.1371/journal.pone.0190061 Text en © 2017 Conrad et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Conrad, Douglas J. Bailey, Barbara A. Hardie, Jon A. Bakke, Per S. Eagan, Tomas M. L. Aarli, Bernt B. Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title | Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title_full | Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title_fullStr | Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title_full_unstemmed | Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title_short | Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients |
title_sort | median regression spline modeling of longitudinal fev(1) measurements in cystic fibrosis (cf) and chronic obstructive pulmonary disease (copd) patients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738083/ https://www.ncbi.nlm.nih.gov/pubmed/29261779 http://dx.doi.org/10.1371/journal.pone.0190061 |
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