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Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients

RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic f...

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Autores principales: Conrad, Douglas J., Bailey, Barbara A., Hardie, Jon A., Bakke, Per S., Eagan, Tomas M. L., Aarli, Bernt B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738083/
https://www.ncbi.nlm.nih.gov/pubmed/29261779
http://dx.doi.org/10.1371/journal.pone.0190061
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author Conrad, Douglas J.
Bailey, Barbara A.
Hardie, Jon A.
Bakke, Per S.
Eagan, Tomas M. L.
Aarli, Bernt B.
author_facet Conrad, Douglas J.
Bailey, Barbara A.
Hardie, Jon A.
Bakke, Per S.
Eagan, Tomas M. L.
Aarli, Bernt B.
author_sort Conrad, Douglas J.
collection PubMed
description RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) populations. METHODS: Individual FEV(1) data from CF and COPD subjects were modeled by estimating median regression splines and their predicted first and second derivatives. Classes were created from variables that capture the dynamics of these curves in both cohorts. RESULTS: Nine FEV(1) dynamic variables were identified from the splines and their predicted derivatives in individuals with CF (n = 177) and COPD (n = 374). Three FEV(1) dynamic classes (i.e. stable, intermediate and hypervariable) were generated and described using these variables from both cohorts. In the CF cohort, the FEV(1) hypervariable class (HV) was associated with a clinically unstable, female-dominated phenotypes while stable FEV(1) class (S) individuals were highly associated with the male-dominated milder clinical phenotype. In the COPD cohort, associations were found between the FEV(1) dynamic classes, the COPD GOLD grades, with exacerbation frequency and symptoms. CONCLUSION: Nonlinear modeling of FEV(1) with splines provides new insights and is useful in characterizing CF and COPD clinical phenotypes.
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spelling pubmed-57380832017-12-29 Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients Conrad, Douglas J. Bailey, Barbara A. Hardie, Jon A. Bakke, Per S. Eagan, Tomas M. L. Aarli, Bernt B. PLoS One Research Article RATIONALE: Clinical phenotyping, therapeutic investigations as well as genomic, airway secretion metabolomic and metagenomic investigations can benefit from robust, nonlinear modeling of FEV(1) in individual subjects. We demonstrate the utility of measuring FEV(1) dynamics in representative cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) populations. METHODS: Individual FEV(1) data from CF and COPD subjects were modeled by estimating median regression splines and their predicted first and second derivatives. Classes were created from variables that capture the dynamics of these curves in both cohorts. RESULTS: Nine FEV(1) dynamic variables were identified from the splines and their predicted derivatives in individuals with CF (n = 177) and COPD (n = 374). Three FEV(1) dynamic classes (i.e. stable, intermediate and hypervariable) were generated and described using these variables from both cohorts. In the CF cohort, the FEV(1) hypervariable class (HV) was associated with a clinically unstable, female-dominated phenotypes while stable FEV(1) class (S) individuals were highly associated with the male-dominated milder clinical phenotype. In the COPD cohort, associations were found between the FEV(1) dynamic classes, the COPD GOLD grades, with exacerbation frequency and symptoms. CONCLUSION: Nonlinear modeling of FEV(1) with splines provides new insights and is useful in characterizing CF and COPD clinical phenotypes. Public Library of Science 2017-12-20 /pmc/articles/PMC5738083/ /pubmed/29261779 http://dx.doi.org/10.1371/journal.pone.0190061 Text en © 2017 Conrad et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Conrad, Douglas J.
Bailey, Barbara A.
Hardie, Jon A.
Bakke, Per S.
Eagan, Tomas M. L.
Aarli, Bernt B.
Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title_full Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title_fullStr Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title_full_unstemmed Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title_short Median regression spline modeling of longitudinal FEV(1) measurements in cystic fibrosis (CF) and chronic obstructive pulmonary disease (COPD) patients
title_sort median regression spline modeling of longitudinal fev(1) measurements in cystic fibrosis (cf) and chronic obstructive pulmonary disease (copd) patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738083/
https://www.ncbi.nlm.nih.gov/pubmed/29261779
http://dx.doi.org/10.1371/journal.pone.0190061
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