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Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard
BACKGROUND: The development of new diagnostics is an important tool in the fight against disease. Latent Class Analysis (LCA) is used to estimate the sensitivity and specificity of tests in the absence of a gold standard. The main field diagnostic for Schistosoma mansoni infection, Kato-Katz (KK), i...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738141/ https://www.ncbi.nlm.nih.gov/pubmed/29220354 http://dx.doi.org/10.1371/journal.pntd.0006102 |
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author | Clements, Michelle N. Donnelly, Christl A. Fenwick, Alan Kabatereine, Narcis B. Knowles, Sarah C. L. Meité, Aboulaye N'Goran, Eliézer K. Nalule, Yolisa Nogaro, Sarah Phillips, Anna E. Tukahebwa, Edridah Muheki Fleming, Fiona M. |
author_facet | Clements, Michelle N. Donnelly, Christl A. Fenwick, Alan Kabatereine, Narcis B. Knowles, Sarah C. L. Meité, Aboulaye N'Goran, Eliézer K. Nalule, Yolisa Nogaro, Sarah Phillips, Anna E. Tukahebwa, Edridah Muheki Fleming, Fiona M. |
author_sort | Clements, Michelle N. |
collection | PubMed |
description | BACKGROUND: The development of new diagnostics is an important tool in the fight against disease. Latent Class Analysis (LCA) is used to estimate the sensitivity and specificity of tests in the absence of a gold standard. The main field diagnostic for Schistosoma mansoni infection, Kato-Katz (KK), is not very sensitive at low infection intensities. A point-of-care circulating cathodic antigen (CCA) test has been shown to be more sensitive than KK. However, CCA can return an ambiguous ‘trace’ result between ‘positive’ and ‘negative’, and much debate has focused on interpretation of traces results. METHODOLOGY/PRINCIPLE FINDINGS: We show how LCA can be extended to include ambiguous trace results and analyse S. mansoni studies from both Côte d’Ivoire (CdI) and Uganda. We compare the diagnostic performance of KK and CCA and the observed results by each test to the estimated infection prevalence in the population. Prevalence by KK was higher in CdI (13.4%) than in Uganda (6.1%), but prevalence by CCA was similar between countries, both when trace was assumed to be negative (CCAtn: 11.7% in CdI and 9.7% in Uganda) and positive (CCAtp: 20.1% in CdI and 22.5% in Uganda). The estimated sensitivity of CCA was more consistent between countries than the estimated sensitivity of KK, and estimated infection prevalence did not significantly differ between CdI (20.5%) and Uganda (19.1%). The prevalence by CCA with trace as positive did not differ significantly from estimates of infection prevalence in either country, whereas both KK and CCA with trace as negative significantly underestimated infection prevalence in both countries. CONCLUSIONS: Incorporation of ambiguous results into an LCA enables the effect of different treatment thresholds to be directly assessed and is applicable in many fields. Our results showed that CCA with trace as positive most accurately estimated infection prevalence. |
format | Online Article Text |
id | pubmed-5738141 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-57381412017-12-29 Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard Clements, Michelle N. Donnelly, Christl A. Fenwick, Alan Kabatereine, Narcis B. Knowles, Sarah C. L. Meité, Aboulaye N'Goran, Eliézer K. Nalule, Yolisa Nogaro, Sarah Phillips, Anna E. Tukahebwa, Edridah Muheki Fleming, Fiona M. PLoS Negl Trop Dis Research Article BACKGROUND: The development of new diagnostics is an important tool in the fight against disease. Latent Class Analysis (LCA) is used to estimate the sensitivity and specificity of tests in the absence of a gold standard. The main field diagnostic for Schistosoma mansoni infection, Kato-Katz (KK), is not very sensitive at low infection intensities. A point-of-care circulating cathodic antigen (CCA) test has been shown to be more sensitive than KK. However, CCA can return an ambiguous ‘trace’ result between ‘positive’ and ‘negative’, and much debate has focused on interpretation of traces results. METHODOLOGY/PRINCIPLE FINDINGS: We show how LCA can be extended to include ambiguous trace results and analyse S. mansoni studies from both Côte d’Ivoire (CdI) and Uganda. We compare the diagnostic performance of KK and CCA and the observed results by each test to the estimated infection prevalence in the population. Prevalence by KK was higher in CdI (13.4%) than in Uganda (6.1%), but prevalence by CCA was similar between countries, both when trace was assumed to be negative (CCAtn: 11.7% in CdI and 9.7% in Uganda) and positive (CCAtp: 20.1% in CdI and 22.5% in Uganda). The estimated sensitivity of CCA was more consistent between countries than the estimated sensitivity of KK, and estimated infection prevalence did not significantly differ between CdI (20.5%) and Uganda (19.1%). The prevalence by CCA with trace as positive did not differ significantly from estimates of infection prevalence in either country, whereas both KK and CCA with trace as negative significantly underestimated infection prevalence in both countries. CONCLUSIONS: Incorporation of ambiguous results into an LCA enables the effect of different treatment thresholds to be directly assessed and is applicable in many fields. Our results showed that CCA with trace as positive most accurately estimated infection prevalence. Public Library of Science 2017-12-08 /pmc/articles/PMC5738141/ /pubmed/29220354 http://dx.doi.org/10.1371/journal.pntd.0006102 Text en © 2017 Clements et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Clements, Michelle N. Donnelly, Christl A. Fenwick, Alan Kabatereine, Narcis B. Knowles, Sarah C. L. Meité, Aboulaye N'Goran, Eliézer K. Nalule, Yolisa Nogaro, Sarah Phillips, Anna E. Tukahebwa, Edridah Muheki Fleming, Fiona M. Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title | Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title_full | Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title_fullStr | Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title_full_unstemmed | Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title_short | Interpreting ambiguous ‘trace’ results in Schistosoma mansoni CCA Tests: Estimating sensitivity and specificity of ambiguous results with no gold standard |
title_sort | interpreting ambiguous ‘trace’ results in schistosoma mansoni cca tests: estimating sensitivity and specificity of ambiguous results with no gold standard |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738141/ https://www.ncbi.nlm.nih.gov/pubmed/29220354 http://dx.doi.org/10.1371/journal.pntd.0006102 |
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