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A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits

BACKGROUND: In patient-based studies, biomarker data are often subject to left censoring due to the detection limits, or to incomplete sample or data collection. In the context of longitudinal regression analysis, inappropriate handling of these issues could lead to biased parameter estimates. We de...

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Autores principales: Lee, MinJae, Rahbar, Mohammad H., Brown, Matthew, Gensler, Lianne, Weisman, Michael, Diekman, Laura, Reveille, John D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5765696/
https://www.ncbi.nlm.nih.gov/pubmed/29325529
http://dx.doi.org/10.1186/s12874-017-0463-9
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author Lee, MinJae
Rahbar, Mohammad H.
Brown, Matthew
Gensler, Lianne
Weisman, Michael
Diekman, Laura
Reveille, John D.
author_facet Lee, MinJae
Rahbar, Mohammad H.
Brown, Matthew
Gensler, Lianne
Weisman, Michael
Diekman, Laura
Reveille, John D.
author_sort Lee, MinJae
collection PubMed
description BACKGROUND: In patient-based studies, biomarker data are often subject to left censoring due to the detection limits, or to incomplete sample or data collection. In the context of longitudinal regression analysis, inappropriate handling of these issues could lead to biased parameter estimates. We developed a specific multiple imputation (MI) strategy based on weighted censored quantile regression (CQR) that not only accounts for censoring, but also missing data at early visits when longitudinal biomarker data are modeled as a covariate. METHODS: We assessed through simulation studies the performances of developed imputation approach by considering various scenarios of covariance structures of longitudinal data and levels of censoring. We also illustrated the application of the proposed method to the Prospective Study of Outcomes in Ankylosing spondylitis (AS) (PSOAS) data to address the issues of censored or missing C-reactive protein (CRP) level at early visits for a group of patients. RESULTS: Our findings from simulation studies indicated that the proposed method performs better than other MI methods by having a higher relative efficiency. We also found that our approach is not sensitive to the choice of covariance structure as compared to other methods that assume normality of biomarker data. The analysis results of PSOAS data from the imputed CRP levels based on our method suggested that higher CRP is significantly associated with radiographic damage, while those from other methods did not result in a significant association. CONCLUSION: The MI based on weighted CQR offers a more valid statistical approach to evaluate a biomarker of disease in the presence of both issues with censoring and missing data in early visits.
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spelling pubmed-57656962018-01-17 A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits Lee, MinJae Rahbar, Mohammad H. Brown, Matthew Gensler, Lianne Weisman, Michael Diekman, Laura Reveille, John D. BMC Med Res Methodol Research Article BACKGROUND: In patient-based studies, biomarker data are often subject to left censoring due to the detection limits, or to incomplete sample or data collection. In the context of longitudinal regression analysis, inappropriate handling of these issues could lead to biased parameter estimates. We developed a specific multiple imputation (MI) strategy based on weighted censored quantile regression (CQR) that not only accounts for censoring, but also missing data at early visits when longitudinal biomarker data are modeled as a covariate. METHODS: We assessed through simulation studies the performances of developed imputation approach by considering various scenarios of covariance structures of longitudinal data and levels of censoring. We also illustrated the application of the proposed method to the Prospective Study of Outcomes in Ankylosing spondylitis (AS) (PSOAS) data to address the issues of censored or missing C-reactive protein (CRP) level at early visits for a group of patients. RESULTS: Our findings from simulation studies indicated that the proposed method performs better than other MI methods by having a higher relative efficiency. We also found that our approach is not sensitive to the choice of covariance structure as compared to other methods that assume normality of biomarker data. The analysis results of PSOAS data from the imputed CRP levels based on our method suggested that higher CRP is significantly associated with radiographic damage, while those from other methods did not result in a significant association. CONCLUSION: The MI based on weighted CQR offers a more valid statistical approach to evaluate a biomarker of disease in the presence of both issues with censoring and missing data in early visits. BioMed Central 2018-01-11 /pmc/articles/PMC5765696/ /pubmed/29325529 http://dx.doi.org/10.1186/s12874-017-0463-9 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License(http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver(http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Lee, MinJae
Rahbar, Mohammad H.
Brown, Matthew
Gensler, Lianne
Weisman, Michael
Diekman, Laura
Reveille, John D.
A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title_full A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title_fullStr A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title_full_unstemmed A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title_short A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
title_sort multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5765696/
https://www.ncbi.nlm.nih.gov/pubmed/29325529
http://dx.doi.org/10.1186/s12874-017-0463-9
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