Cargando…
Discovery of cell-type specific DNA motif grammar in cis-regulatory elements using random Forest
BACKGROUND: It has been observed that many transcription factors (TFs) can bind to different genomic loci depending on the cell type in which a TF is expressed in, even though the individual TF usually binds to the same core motif in different cell types. How a TF can bind to the genome in such a hi...
Autores principales: | Wang, Xin, Lin, Peijie, Ho, Joshua W. K. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5780765/ https://www.ncbi.nlm.nih.gov/pubmed/29363433 http://dx.doi.org/10.1186/s12864-017-4340-z |
Ejemplares similares
-
Synthetic and genomic regulatory elements reveal aspects of cis-regulatory grammar in mouse embryonic stem cells
por: King, Dana M, et al.
Publicado: (2020) -
Genome-wide analysis of cis-regulatory element structure and discovery of motif-driven gene co-expression networks in grapevine
por: Wong, Darren Chern Jan, et al.
Publicado: (2017) -
Computational discovery of cis-regulatory modules in Drosophila without prior knowledge of motifs
por: Ivan, Andra, et al.
Publicado: (2008) -
BLSSpeller: exhaustive comparative discovery of conserved cis-regulatory elements
por: De Witte, Dieter, et al.
Publicado: (2015) -
High-throughput discovery of post-transcriptional cis-regulatory elements
por: Wissink, Erin M., et al.
Publicado: (2016)