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Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform

The KRAS oncogene is involved in the pathogenesis of several types of cancer, particularly colorectal cancer (CRC). The most frequent mutations in this gene are associated with poor survival, increased tumor aggressiveness and resistance to therapy with anti-epidermal growth factor receptor (EGFR) a...

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Autores principales: Guarnaccia, Maria, Iemmolo, Rosario, San Biagio, Floriana, Alessi, Enrico, Cavallaro, Sebastiano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5795341/
https://www.ncbi.nlm.nih.gov/pubmed/29304017
http://dx.doi.org/10.3390/s18010131
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author Guarnaccia, Maria
Iemmolo, Rosario
San Biagio, Floriana
Alessi, Enrico
Cavallaro, Sebastiano
author_facet Guarnaccia, Maria
Iemmolo, Rosario
San Biagio, Floriana
Alessi, Enrico
Cavallaro, Sebastiano
author_sort Guarnaccia, Maria
collection PubMed
description The KRAS oncogene is involved in the pathogenesis of several types of cancer, particularly colorectal cancer (CRC). The most frequent mutations in this gene are associated with poor survival, increased tumor aggressiveness and resistance to therapy with anti-epidermal growth factor receptor (EGFR) antibodies. For this reason, KRAS mutation testing has become increasingly common in clinical practice for personalized cancer treatments of CRC patients. Detection methods for KRAS mutations are currently expensive, laborious, time-consuming and often lack of diagnostic sensitivity and specificity. In this study, we describe the development of a Lab-on-Chip assay for genotyping of KRAS mutational status. This assay, based on the In-Check platform, integrates microfluidic handling, a multiplex polymerase chain reaction (PCR) and a low-density microarray. This integrated sample-to-result system enables the detection of KRAS point mutations, including those occurring in codons 12 and 13 of exon 2, 59 and 61 of exon 3, 117 and 146 of exon 4. Thanks to its miniaturization, automation, rapid analysis, minimal risk of sample contamination, increased accuracy and reproducibility of results, this Lab-on-Chip platform may offer immediate opportunities to simplify KRAS genotyping into clinical routine.
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spelling pubmed-57953412018-02-13 Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform Guarnaccia, Maria Iemmolo, Rosario San Biagio, Floriana Alessi, Enrico Cavallaro, Sebastiano Sensors (Basel) Article The KRAS oncogene is involved in the pathogenesis of several types of cancer, particularly colorectal cancer (CRC). The most frequent mutations in this gene are associated with poor survival, increased tumor aggressiveness and resistance to therapy with anti-epidermal growth factor receptor (EGFR) antibodies. For this reason, KRAS mutation testing has become increasingly common in clinical practice for personalized cancer treatments of CRC patients. Detection methods for KRAS mutations are currently expensive, laborious, time-consuming and often lack of diagnostic sensitivity and specificity. In this study, we describe the development of a Lab-on-Chip assay for genotyping of KRAS mutational status. This assay, based on the In-Check platform, integrates microfluidic handling, a multiplex polymerase chain reaction (PCR) and a low-density microarray. This integrated sample-to-result system enables the detection of KRAS point mutations, including those occurring in codons 12 and 13 of exon 2, 59 and 61 of exon 3, 117 and 146 of exon 4. Thanks to its miniaturization, automation, rapid analysis, minimal risk of sample contamination, increased accuracy and reproducibility of results, this Lab-on-Chip platform may offer immediate opportunities to simplify KRAS genotyping into clinical routine. MDPI 2018-01-05 /pmc/articles/PMC5795341/ /pubmed/29304017 http://dx.doi.org/10.3390/s18010131 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Guarnaccia, Maria
Iemmolo, Rosario
San Biagio, Floriana
Alessi, Enrico
Cavallaro, Sebastiano
Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title_full Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title_fullStr Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title_full_unstemmed Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title_short Genotyping of KRAS Mutational Status by the In-Check Lab-on-Chip Platform
title_sort genotyping of kras mutational status by the in-check lab-on-chip platform
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5795341/
https://www.ncbi.nlm.nih.gov/pubmed/29304017
http://dx.doi.org/10.3390/s18010131
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