Optimal compressed representation of high throughput sequence data via light assembly

The most effective genomic data compression methods either assemble reads into contigs, or replace them with their alignment positions on a reference genome. Such methods require significant computational resources, but faster alternatives that avoid using explicit or de novo-constructed references...

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Detalles Bibliográficos
Autores principales: Ginart, Antonio A., Hui, Joseph, Zhu, Kaiyuan, Numanagić, Ibrahim, Courtade, Thomas A., Sahinalp, S. Cenk, Tse, David N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805770/
https://www.ncbi.nlm.nih.gov/pubmed/29422526
http://dx.doi.org/10.1038/s41467-017-02480-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805770/
https://www.ncbi.nlm.nih.gov/pubmed/29422526
http://dx.doi.org/10.1038/s41467-017-02480-6

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