Cargando…

On the Reproducibility of Label-Free Quantitative Cross-Linking/Mass Spectrometry

Quantitative cross-linking/mass spectrometry (QCLMS) is an emerging approach to study conformational changes of proteins and multi-subunit complexes. Distinguishing protein conformations requires reproducibly identifying and quantifying cross-linked peptides. Here we analyzed the variation between m...

Descripción completa

Detalles Bibliográficos
Autores principales:	Müller, Fränze, Fischer, Lutz, Chen, Zhuo Angel, Auchynnikava, Tania, Rappsilber, Juri
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer US 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814520/ https://www.ncbi.nlm.nih.gov/pubmed/29256016 http://dx.doi.org/10.1007/s13361-017-1837-2

Ejemplares similares

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers()
por: Fischer, Lutz, et al.
Publicado: (2013)

Quantitative Cross-linking/Mass Spectrometry Using Isotope-labeled Cross-linkers and MaxQuant
por: Chen, Zhuo A., et al.
Publicado: (2016)

Data-independent Acquisition Improves Quantitative Cross-linking Mass Spectrometry
por: Müller, Fränze, et al.
Publicado: (2019)

Quirks of Error Estimation in Cross-Linking/Mass Spectrometry
por: Fischer, Lutz, et al.
Publicado: (2017)

Quantitative cross-linking/mass spectrometry reveals subtle protein conformational changes
por: Chen, Zhuo, et al.
Publicado: (2016)

Quantitative Photo-crosslinking Mass Spectrometry Revealing Protein Structure Response to Environmental Changes
por: Müller, Fränze, et al.
Publicado: (2019)

Structure of Complement C3(H(2)O) Revealed By Quantitative Cross-Linking/Mass Spectrometry And Modeling
por: Chen, Zhuo A., et al.
Publicado: (2016)

Protein Dynamics in Solution by Quantitative Crosslinking/Mass Spectrometry
por: Chen, Zhuo A., et al.
Publicado: (2018)

Noncovalently Associated Peptides Observed during Liquid Chromatography-Mass Spectrometry and Their Effect on Cross-Link Analyses
por: Giese, Sven H., et al.
Publicado: (2019)

Architecture of the RNA polymerase II–TFIIF complex revealed by cross-linking and mass spectrometry
por: Chen, Zhuo Angel, et al.
Publicado: (2010)

Complementary Benzophenone Cross-Linking/Mass Spectrometry Photochemistry
por: Belsom, Adam, et al.
Publicado: (2017)

Sequential Digestion with Trypsin and Elastase in Cross-Linking Mass Spectrometry
por: Dau, Therese, et al.
Publicado: (2019)

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes
por: Rappsilber, Juri
Publicado: (2011)

Blind testing of cross‐linking/mass spectrometry hybrid methods in CASP11
por: Schneider, Michael, et al.
Publicado: (2016)

Dynamics of Ribosomal Protein S1 on a Bacterial Ribosome with Cross-Linking and Mass Spectrometry
por: Lauber, Matthew A., et al.
Publicado: (2012)

In Situ Structural Restraints from Cross-Linking Mass Spectrometry in Human Mitochondria
por: Ryl, Petra S. J., et al.
Publicado: (2019)

Blind testing cross-linking/mass spectrometry under the auspices of the 11 (th) critical assessment of methods of protein structure prediction (CASP11)
por: Belsom, Adam, et al.
Publicado: (2016)

Serum Albumin Domain Structures in Human Blood Serum by Mass Spectrometry and Computational Biology
por: Belsom, Adam, et al.
Publicado: (2016)

Mass Spectrometry-Based Label-Free Quantitative Proteomics
por: Zhu, Wenhong, et al.
Publicado: (2010)

Issues and Applications in Label-Free Quantitative Mass Spectrometry
por: Lai, Xianyin, et al.
Publicado: (2013)

Reliable identification of protein-protein interactions by crosslinking mass spectrometry
por: Lenz, Swantje, et al.
Publicado: (2021)

Leveraging Parameter Dependencies in High-Field Asymmetric Waveform Ion-Mobility Spectrometry and Size Exclusion Chromatography for Proteome-wide Cross-Linking Mass Spectrometry
por: Sinn, Ludwig R., et al.
Publicado: (2022)

xiNET: Cross-link Network Maps With Residue Resolution
por: Combe, Colin W., et al.
Publicado: (2015)

Protein Tertiary Structure by Crosslinking/Mass Spectrometry
por: Schneider, Michael, et al.
Publicado: (2018)

Is mass spectrometry ready for proteome-wide protein expression analysis?
por: Rappsilber, Juri, et al.
Publicado: (2002)

A Study into the Collision-induced Dissociation (CID) Behavior of Cross-Linked Peptides
por: Giese, Sven H., et al.
Publicado: (2016)

Deletion of Genes Encoding Arginase Improves Use of “Heavy” Isotope-Labeled Arginine for Mass Spectrometry in Fission Yeast
por: Borek, Weronika E., et al.
Publicado: (2015)

Cross-linking mass spectrometry identifies new interfaces of Augmin required to localise the γ-tubulin ring complex to the mitotic spindle
por: Chen, Jack W. C., et al.
Publicado: (2017)

In-Search Assignment of Monoisotopic Peaks Improves the Identification of Cross-Linked Peptides
por: Lenz, Swantje, et al.
Publicado: (2018)

An integrated workflow for crosslinking mass spectrometry
por: Mendes, Marta L, et al.
Publicado: (2019)

Mass spectrometry-based, label-free quantitative proteomics of round spermatids in mice
por: WANG, HAILONG, et al.
Publicado: (2014)

Direct Identification of Functional Amyloid Proteins by Label-Free Quantitative Mass Spectrometry
por: Danielsen, Heidi N., et al.
Publicado: (2017)

False discovery rate estimation and heterobifunctional cross-linkers
por: Fischer, Lutz, et al.
Publicado: (2018)

A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry
por: Aoshima, Ken, et al.
Publicado: (2014)

Urinary biomarkers for the diagnosis of cervical cancer by quantitative label-free mass spectrometry analysis
por: Chokchaichamnankit, Daranee, et al.
Publicado: (2019)

Optimizing the Parameters Governing the Fragmentation of Cross-Linked Peptides in a Tribrid Mass Spectrometer
por: Kolbowski, Lars, et al.
Publicado: (2017)

Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry
por: Collins, Ben C., et al.
Publicado: (2017)

ARiBo pull-down for riboproteomic studies based on label-free quantitative mass spectrometry
por: Di Tomasso, Geneviève, et al.
Publicado: (2016)

Phosphopeptide Enrichment Coupled with Label-free Quantitative Mass Spectrometry to Investigate the Phosphoproteome in Prostate Cancer
por: Cheng, Larry C., et al.
Publicado: (2018)

Monitoring storage induced changes in the platelet proteome employing label free quantitative mass spectrometry
por: Rijkers, Maaike, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_h581cah58ruhp43e1scu6dsg67