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The Effect of RNA Substitution Models on Viroid and RNA Virus Phylogenies

Many viroids and RNA viruses have genomes that exhibit secondary structure, with paired nucleotides forming stems and loops. Such structures violate a key assumption of most methods of phylogenetic reconstruction, that sequence change is independent among sites. However, phylogenetic analyses of the...

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Detalles Bibliográficos
Autores principales: Patiño-Galindo, Juan Ángel, González-Candelas, Fernando, Pybus, Oliver G
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814974/
https://www.ncbi.nlm.nih.gov/pubmed/29325030
http://dx.doi.org/10.1093/gbe/evx273