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Introducing difference recurrence relations for faster semi-global alignment of long sequences
BACKGROUND: The read length of single-molecule DNA sequencers is reaching 1 Mb. Popular alignment software tools widely used for analyzing such long reads often take advantage of single-instruction multiple-data (SIMD) operations to accelerate calculation of dynamic programming (DP) matrices in the...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2018
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5836832/ https://www.ncbi.nlm.nih.gov/pubmed/29504909 http://dx.doi.org/10.1186/s12859-018-2014-8 |