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A model for estimating pathogen variability in shellfish and predicting minimum depuration times

Norovirus is a major cause of viral gastroenteritis, with shellfish consumption being identified as one potential norovirus entry point into the human population. Minimising shellfish norovirus levels is therefore important for both the consumer’s protection and the shellfish industry’s reputation....

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Autores principales: McMenemy, Paul, Kleczkowski, Adam, Lees, David N., Lowther, James, Taylor, Nick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5841822/
https://www.ncbi.nlm.nih.gov/pubmed/29513747
http://dx.doi.org/10.1371/journal.pone.0193865
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author McMenemy, Paul
Kleczkowski, Adam
Lees, David N.
Lowther, James
Taylor, Nick
author_facet McMenemy, Paul
Kleczkowski, Adam
Lees, David N.
Lowther, James
Taylor, Nick
author_sort McMenemy, Paul
collection PubMed
description Norovirus is a major cause of viral gastroenteritis, with shellfish consumption being identified as one potential norovirus entry point into the human population. Minimising shellfish norovirus levels is therefore important for both the consumer’s protection and the shellfish industry’s reputation. One method used to reduce microbiological risks in shellfish is depuration; however, this process also presents additional costs to industry. Providing a mechanism to estimate norovirus levels during depuration would therefore be useful to stakeholders. This paper presents a mathematical model of the depuration process and its impact on norovirus levels found in shellfish. Two fundamental stages of norovirus depuration are considered: (i) the initial distribution of norovirus loads within a shellfish population and (ii) the way in which the initial norovirus loads evolve during depuration. Realistic assumptions are made about the dynamics of norovirus during depuration, and mathematical descriptions of both stages are derived and combined into a single model. Parameters to describe the depuration effect and norovirus load values are derived from existing norovirus data obtained from U.K. harvest sites. However, obtaining population estimates of norovirus variability is time-consuming and expensive; this model addresses the issue by assuming a ‘worst case scenario’ for variability of pathogens, which is independent of mean pathogen levels. The model is then used to predict minimum depuration times required to achieve norovirus levels which fall within possible risk management levels, as well as predictions of minimum depuration times for other water-borne pathogens found in shellfish. Times for Escherichia coli predicted by the model all fall within the minimum 42 hours required for class B harvest sites, whereas minimum depuration times for norovirus and FRNA+ bacteriophage are substantially longer. Thus this study provides relevant information and tools to assist norovirus risk managers with future control strategies.
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spelling pubmed-58418222018-03-23 A model for estimating pathogen variability in shellfish and predicting minimum depuration times McMenemy, Paul Kleczkowski, Adam Lees, David N. Lowther, James Taylor, Nick PLoS One Research Article Norovirus is a major cause of viral gastroenteritis, with shellfish consumption being identified as one potential norovirus entry point into the human population. Minimising shellfish norovirus levels is therefore important for both the consumer’s protection and the shellfish industry’s reputation. One method used to reduce microbiological risks in shellfish is depuration; however, this process also presents additional costs to industry. Providing a mechanism to estimate norovirus levels during depuration would therefore be useful to stakeholders. This paper presents a mathematical model of the depuration process and its impact on norovirus levels found in shellfish. Two fundamental stages of norovirus depuration are considered: (i) the initial distribution of norovirus loads within a shellfish population and (ii) the way in which the initial norovirus loads evolve during depuration. Realistic assumptions are made about the dynamics of norovirus during depuration, and mathematical descriptions of both stages are derived and combined into a single model. Parameters to describe the depuration effect and norovirus load values are derived from existing norovirus data obtained from U.K. harvest sites. However, obtaining population estimates of norovirus variability is time-consuming and expensive; this model addresses the issue by assuming a ‘worst case scenario’ for variability of pathogens, which is independent of mean pathogen levels. The model is then used to predict minimum depuration times required to achieve norovirus levels which fall within possible risk management levels, as well as predictions of minimum depuration times for other water-borne pathogens found in shellfish. Times for Escherichia coli predicted by the model all fall within the minimum 42 hours required for class B harvest sites, whereas minimum depuration times for norovirus and FRNA+ bacteriophage are substantially longer. Thus this study provides relevant information and tools to assist norovirus risk managers with future control strategies. Public Library of Science 2018-03-07 /pmc/articles/PMC5841822/ /pubmed/29513747 http://dx.doi.org/10.1371/journal.pone.0193865 Text en © 2018 McMenemy et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
McMenemy, Paul
Kleczkowski, Adam
Lees, David N.
Lowther, James
Taylor, Nick
A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title_full A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title_fullStr A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title_full_unstemmed A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title_short A model for estimating pathogen variability in shellfish and predicting minimum depuration times
title_sort model for estimating pathogen variability in shellfish and predicting minimum depuration times
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5841822/
https://www.ncbi.nlm.nih.gov/pubmed/29513747
http://dx.doi.org/10.1371/journal.pone.0193865
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