MentaLiST – A fast MLST caller for large MLST schemes

MLST (multi-locus sequence typing) is a classic technique for genotyping bacteria, widely applied for pathogen outbreak surveillance. Traditionally, MLST is based on identifying sequence types from a small number of housekeeping genes. With the increasing availability of whole-genome sequencing data...

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Detalles Bibliográficos
Autores principales: Feijao, Pedro, Yao, Hua-Ting, Fornika, Dan, Gardy, Jennifer, Hsiao, William, Chauve, Cedric, Chindelevitch, Leonid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2018
Materias:
Methods Paper
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857373/
https://www.ncbi.nlm.nih.gov/pubmed/29319471
http://dx.doi.org/10.1099/mgen.0.000146

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857373/
https://www.ncbi.nlm.nih.gov/pubmed/29319471
http://dx.doi.org/10.1099/mgen.0.000146

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