Species classifier choice is a key consideration when analysing low-complexity food microbiome data

BACKGROUND: The use of shotgun metagenomics to analyse low-complexity microbial communities in foods has the potential to be of considerable fundamental and applied value. However, there is currently no consensus with respect to choice of species classification tool, platform, or sequencing depth. H...

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Detalles Bibliográficos
Autores principales: Walsh, Aaron M., Crispie, Fiona, O’Sullivan, Orla, Finnegan, Laura, Claesson, Marcus J., Cotter, Paul D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5859664/
https://www.ncbi.nlm.nih.gov/pubmed/29554948
http://dx.doi.org/10.1186/s40168-018-0437-0

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5859664/
https://www.ncbi.nlm.nih.gov/pubmed/29554948
http://dx.doi.org/10.1186/s40168-018-0437-0

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