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QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors
BACKGROUND: Quantitative structure–activity relationship (QSAR) was carried out to study a series of aminooxadiazoles as PIM1 inhibitors having pk(i) ranging from 5.59 to 9.62 (k(i) in nM). The present study was performed using Genetic Algorithm method of variable selection (GFA), multiple linear re...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5862716/ https://www.ncbi.nlm.nih.gov/pubmed/29564572 http://dx.doi.org/10.1186/s13065-018-0401-x |
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author | Aouidate, Adnane Ghaleb, Adib Ghamali, Mounir Chtita, Samir Ousaa, Abdellah Choukrad, M’barek Sbai, Abdelouahid Bouachrine, Mohammed Lakhlifi, Tahar |
author_facet | Aouidate, Adnane Ghaleb, Adib Ghamali, Mounir Chtita, Samir Ousaa, Abdellah Choukrad, M’barek Sbai, Abdelouahid Bouachrine, Mohammed Lakhlifi, Tahar |
author_sort | Aouidate, Adnane |
collection | PubMed |
description | BACKGROUND: Quantitative structure–activity relationship (QSAR) was carried out to study a series of aminooxadiazoles as PIM1 inhibitors having pk(i) ranging from 5.59 to 9.62 (k(i) in nM). The present study was performed using Genetic Algorithm method of variable selection (GFA), multiple linear regression analysis (MLR) and non-linear multiple regression analysis (MNLR) to build unambiguous QSAR models of 34 substituted aminooxadiazoles toward PIM1 inhibitory activity based on topological descriptors. RESULTS: Results showed that the MLR and MNLR predict activity in a satisfactory manner. We concluded that both models provide a high agreement between the predicted and observed values of PIM1 inhibitory activity. Also, they exhibit good stability towards data variations for the validation methods. Furthermore, based on the similarity principle we performed a database screening to identify putative PIM1 candidates inhibitors, and predict their inhibitory activities using the proposed MLR model. CONCLUSIONS: This approach can be easily handled by chemists, to distinguish, which ones among the future designed aminooxadiazoles structures could be lead-like and those that couldn’t be, thus, they can be eliminated in the early stages of drug discovery process. [Image: see text] |
format | Online Article Text |
id | pubmed-5862716 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-58627162018-03-26 QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors Aouidate, Adnane Ghaleb, Adib Ghamali, Mounir Chtita, Samir Ousaa, Abdellah Choukrad, M’barek Sbai, Abdelouahid Bouachrine, Mohammed Lakhlifi, Tahar Chem Cent J Research Article BACKGROUND: Quantitative structure–activity relationship (QSAR) was carried out to study a series of aminooxadiazoles as PIM1 inhibitors having pk(i) ranging from 5.59 to 9.62 (k(i) in nM). The present study was performed using Genetic Algorithm method of variable selection (GFA), multiple linear regression analysis (MLR) and non-linear multiple regression analysis (MNLR) to build unambiguous QSAR models of 34 substituted aminooxadiazoles toward PIM1 inhibitory activity based on topological descriptors. RESULTS: Results showed that the MLR and MNLR predict activity in a satisfactory manner. We concluded that both models provide a high agreement between the predicted and observed values of PIM1 inhibitory activity. Also, they exhibit good stability towards data variations for the validation methods. Furthermore, based on the similarity principle we performed a database screening to identify putative PIM1 candidates inhibitors, and predict their inhibitory activities using the proposed MLR model. CONCLUSIONS: This approach can be easily handled by chemists, to distinguish, which ones among the future designed aminooxadiazoles structures could be lead-like and those that couldn’t be, thus, they can be eliminated in the early stages of drug discovery process. [Image: see text] Springer International Publishing 2018-03-22 /pmc/articles/PMC5862716/ /pubmed/29564572 http://dx.doi.org/10.1186/s13065-018-0401-x Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Aouidate, Adnane Ghaleb, Adib Ghamali, Mounir Chtita, Samir Ousaa, Abdellah Choukrad, M’barek Sbai, Abdelouahid Bouachrine, Mohammed Lakhlifi, Tahar QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title | QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title_full | QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title_fullStr | QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title_full_unstemmed | QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title_short | QSAR study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as PIM1 inhibitors |
title_sort | qsar study and rustic ligand-based virtual screening in a search for aminooxadiazole derivatives as pim1 inhibitors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5862716/ https://www.ncbi.nlm.nih.gov/pubmed/29564572 http://dx.doi.org/10.1186/s13065-018-0401-x |
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