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Polygenic risk score: use in migraine research

BACKGROUND: The latest Genome-Wide Association Study identified 38 genetic variants associated with migraine. In this type of studies the significance level is very difficult to achieve (5 × 10(− 8)) due to multiple testing. Thus, the identified variants only explain a small fraction of the genetic...

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Autores principales: Chalmer, Mona Ameri, Esserlind, Ann-Louise, Olesen, Jes, Hansen, Thomas Folkmann
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Milan 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887014/
https://www.ncbi.nlm.nih.gov/pubmed/29623444
http://dx.doi.org/10.1186/s10194-018-0856-0
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author Chalmer, Mona Ameri
Esserlind, Ann-Louise
Olesen, Jes
Hansen, Thomas Folkmann
author_facet Chalmer, Mona Ameri
Esserlind, Ann-Louise
Olesen, Jes
Hansen, Thomas Folkmann
author_sort Chalmer, Mona Ameri
collection PubMed
description BACKGROUND: The latest Genome-Wide Association Study identified 38 genetic variants associated with migraine. In this type of studies the significance level is very difficult to achieve (5 × 10(− 8)) due to multiple testing. Thus, the identified variants only explain a small fraction of the genetic risk. It is expected that hundreds of thousands of variants also confer an increased risk but do not reach significance levels. One way to capture this information is by constructing a Polygenic Risk Score. Polygenic Risk Score has been widely used with success in genetics studies within neuropsychiatric disorders. The use of polygenic scores is highly relevant as data from a large migraine Genome-Wide Association Study are now available, which will form an excellent basis for Polygenic Risk Score in migraine studies. RESULTS: Polygenic Risk Score has been used in studies of neuropsychiatric disorders to assess prediction of disease status in case-control studies, shared genetic correlation between co-morbid diseases, and shared genetic correlation between a disease and specific endophenotypes. CONCLUSION: Polygenic Risk Score provides an opportunity to investigate the shared genetic risk between known and previously unestablished co-morbidities in migraine research, and may lead to better and personalized treatment of migraine if used as a clinical assistant when identifying responders to specific drugs. Polygenic Risk Score can be used to analyze the genetic relationship between different headache types and migraine endophenotypes. Finally, Polygenic Risk Score can be used to assess pharmacogenetic effects, and perhaps help to predict efficacy of the Calcitonin Gene-Related Peptide monoclonal antibodies that soon become available as migraine treatment. KEYWORDS: Migraine genetics; Genome-Wide Association Studies; Polygenic Risk Score; pleiotropy; endophenotype.
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spelling pubmed-58870142018-04-12 Polygenic risk score: use in migraine research Chalmer, Mona Ameri Esserlind, Ann-Louise Olesen, Jes Hansen, Thomas Folkmann J Headache Pain Review Article BACKGROUND: The latest Genome-Wide Association Study identified 38 genetic variants associated with migraine. In this type of studies the significance level is very difficult to achieve (5 × 10(− 8)) due to multiple testing. Thus, the identified variants only explain a small fraction of the genetic risk. It is expected that hundreds of thousands of variants also confer an increased risk but do not reach significance levels. One way to capture this information is by constructing a Polygenic Risk Score. Polygenic Risk Score has been widely used with success in genetics studies within neuropsychiatric disorders. The use of polygenic scores is highly relevant as data from a large migraine Genome-Wide Association Study are now available, which will form an excellent basis for Polygenic Risk Score in migraine studies. RESULTS: Polygenic Risk Score has been used in studies of neuropsychiatric disorders to assess prediction of disease status in case-control studies, shared genetic correlation between co-morbid diseases, and shared genetic correlation between a disease and specific endophenotypes. CONCLUSION: Polygenic Risk Score provides an opportunity to investigate the shared genetic risk between known and previously unestablished co-morbidities in migraine research, and may lead to better and personalized treatment of migraine if used as a clinical assistant when identifying responders to specific drugs. Polygenic Risk Score can be used to analyze the genetic relationship between different headache types and migraine endophenotypes. Finally, Polygenic Risk Score can be used to assess pharmacogenetic effects, and perhaps help to predict efficacy of the Calcitonin Gene-Related Peptide monoclonal antibodies that soon become available as migraine treatment. KEYWORDS: Migraine genetics; Genome-Wide Association Studies; Polygenic Risk Score; pleiotropy; endophenotype. Springer Milan 2018-04-05 /pmc/articles/PMC5887014/ /pubmed/29623444 http://dx.doi.org/10.1186/s10194-018-0856-0 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Review Article
Chalmer, Mona Ameri
Esserlind, Ann-Louise
Olesen, Jes
Hansen, Thomas Folkmann
Polygenic risk score: use in migraine research
title Polygenic risk score: use in migraine research
title_full Polygenic risk score: use in migraine research
title_fullStr Polygenic risk score: use in migraine research
title_full_unstemmed Polygenic risk score: use in migraine research
title_short Polygenic risk score: use in migraine research
title_sort polygenic risk score: use in migraine research
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887014/
https://www.ncbi.nlm.nih.gov/pubmed/29623444
http://dx.doi.org/10.1186/s10194-018-0856-0
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