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Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs

Multicellular organisms consist of multiple cell types. The identity of these cells is primarily maintained by cell-type-specific gene expression programs; however, mechanisms that suppress these programs are poorly defined. Here we show that serum response factor (Srf), a transcription factor that...

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Autores principales: Ikeda, Takashi, Hikichi, Takafusa, Miura, Hisashi, Shibata, Hirofumi, Mitsunaga, Kanae, Yamada, Yosuke, Woltjen, Knut, Miyamoto, Kei, Hiratani, Ichiro, Yamada, Yasuhiro, Hotta, Akitsu, Yamamoto, Takuya, Okita, Keisuke, Masui, Shinji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5895821/
https://www.ncbi.nlm.nih.gov/pubmed/29643333
http://dx.doi.org/10.1038/s41467-018-03748-1
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author Ikeda, Takashi
Hikichi, Takafusa
Miura, Hisashi
Shibata, Hirofumi
Mitsunaga, Kanae
Yamada, Yosuke
Woltjen, Knut
Miyamoto, Kei
Hiratani, Ichiro
Yamada, Yasuhiro
Hotta, Akitsu
Yamamoto, Takuya
Okita, Keisuke
Masui, Shinji
author_facet Ikeda, Takashi
Hikichi, Takafusa
Miura, Hisashi
Shibata, Hirofumi
Mitsunaga, Kanae
Yamada, Yosuke
Woltjen, Knut
Miyamoto, Kei
Hiratani, Ichiro
Yamada, Yasuhiro
Hotta, Akitsu
Yamamoto, Takuya
Okita, Keisuke
Masui, Shinji
author_sort Ikeda, Takashi
collection PubMed
description Multicellular organisms consist of multiple cell types. The identity of these cells is primarily maintained by cell-type-specific gene expression programs; however, mechanisms that suppress these programs are poorly defined. Here we show that serum response factor (Srf), a transcription factor that is activated by various extracellular stimuli, can repress cell-type-specific genes and promote cellular reprogramming to pluripotency. Manipulations that decrease β-actin monomer quantity result in the nuclear accumulation of Mkl1 and the activation of Srf, which downregulate cell-type-specific genes and alter the epigenetics of regulatory regions and chromatin organization. Mice overexpressing Srf exhibit various pathologies including an ulcerative colitis-like symptom and a metaplasia-like phenotype in the pancreas. Our results demonstrate an unexpected function of Srf via a mechanism by which extracellular stimuli actively destabilize cell identity and suggest Srf involvement in a wide range of diseases.
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spelling pubmed-58958212018-04-13 Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs Ikeda, Takashi Hikichi, Takafusa Miura, Hisashi Shibata, Hirofumi Mitsunaga, Kanae Yamada, Yosuke Woltjen, Knut Miyamoto, Kei Hiratani, Ichiro Yamada, Yasuhiro Hotta, Akitsu Yamamoto, Takuya Okita, Keisuke Masui, Shinji Nat Commun Article Multicellular organisms consist of multiple cell types. The identity of these cells is primarily maintained by cell-type-specific gene expression programs; however, mechanisms that suppress these programs are poorly defined. Here we show that serum response factor (Srf), a transcription factor that is activated by various extracellular stimuli, can repress cell-type-specific genes and promote cellular reprogramming to pluripotency. Manipulations that decrease β-actin monomer quantity result in the nuclear accumulation of Mkl1 and the activation of Srf, which downregulate cell-type-specific genes and alter the epigenetics of regulatory regions and chromatin organization. Mice overexpressing Srf exhibit various pathologies including an ulcerative colitis-like symptom and a metaplasia-like phenotype in the pancreas. Our results demonstrate an unexpected function of Srf via a mechanism by which extracellular stimuli actively destabilize cell identity and suggest Srf involvement in a wide range of diseases. Nature Publishing Group UK 2018-04-11 /pmc/articles/PMC5895821/ /pubmed/29643333 http://dx.doi.org/10.1038/s41467-018-03748-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ikeda, Takashi
Hikichi, Takafusa
Miura, Hisashi
Shibata, Hirofumi
Mitsunaga, Kanae
Yamada, Yosuke
Woltjen, Knut
Miyamoto, Kei
Hiratani, Ichiro
Yamada, Yasuhiro
Hotta, Akitsu
Yamamoto, Takuya
Okita, Keisuke
Masui, Shinji
Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title_full Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title_fullStr Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title_full_unstemmed Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title_short Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
title_sort srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5895821/
https://www.ncbi.nlm.nih.gov/pubmed/29643333
http://dx.doi.org/10.1038/s41467-018-03748-1
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