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Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene

DNA templates with 8‐hydroxyguanine (7,8‐dihydro‐8‐oxoguanine, oh(8)Gua) at a site corresponding to the first or second position of codon 12 of the c‐Ha‐ras gene were prepared, and the nucleotides inserted opposite the modified base were compared. The Klenow fragment (KF) of Escherichia coli DNA pol...

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Autores principales: Kamiya, Hiroyuki, Murata‐Kamiya, Naoko, Fujimuro, Masahiro, Kido, Kaori, Inoue, Hideo, Nishimura, Susumu, Masutani, Chikahide, Hanaoka, Fumio, Ohtsuka, Eiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 1995
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5920815/
https://www.ncbi.nlm.nih.gov/pubmed/7744697
http://dx.doi.org/10.1111/j.1349-7006.1995.tb03050.x
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author Kamiya, Hiroyuki
Murata‐Kamiya, Naoko
Fujimuro, Masahiro
Kido, Kaori
Inoue, Hideo
Nishimura, Susumu
Masutani, Chikahide
Hanaoka, Fumio
Ohtsuka, Eiko
author_facet Kamiya, Hiroyuki
Murata‐Kamiya, Naoko
Fujimuro, Masahiro
Kido, Kaori
Inoue, Hideo
Nishimura, Susumu
Masutani, Chikahide
Hanaoka, Fumio
Ohtsuka, Eiko
author_sort Kamiya, Hiroyuki
collection PubMed
description DNA templates with 8‐hydroxyguanine (7,8‐dihydro‐8‐oxoguanine, oh(8)Gua) at a site corresponding to the first or second position of codon 12 of the c‐Ha‐ras gene were prepared, and the nucleotides inserted opposite the modified base were compared. The Klenow fragment (KF) of Escherichia coli DNA polymerase I inserted C opposite oh(8)Gua at both positions. Taq DNA polymerase incorporated C and A opposite oh(8)Gua, and the ratio of C to A was higher at the first position than at the second position. DNA polymerase α (pol α) inserted A and C at the first position, and A at the second position of codon 12, indicating that the ratio of C to A was higher at the first position. Moreover, we studied the extensions of bases paired with oh(8)Gua by DNA polymerases with or without 3′‐5’exonuclease activity. G and T opposite oh(8)Gua were removed, and subsequently C was inserted by KF. We found that an oh(8)Gua:A pair was recognized by the exonuclease activity of the enzyme and that A was partially subsituted by C. On the other hand, pol α extended only C and A opposite oh(8)Gua. No difference was observed with oh(8)Gua at the two positions. These results indicate that the ratio of nucleotides incorporated opposite oh(8)Gua depends on the sequence context, while there is no particular difference in the extension of base pairs involving oh(8)Gua by DNA polymerases.
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spelling pubmed-59208152018-05-11 Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene Kamiya, Hiroyuki Murata‐Kamiya, Naoko Fujimuro, Masahiro Kido, Kaori Inoue, Hideo Nishimura, Susumu Masutani, Chikahide Hanaoka, Fumio Ohtsuka, Eiko Jpn J Cancer Res Article DNA templates with 8‐hydroxyguanine (7,8‐dihydro‐8‐oxoguanine, oh(8)Gua) at a site corresponding to the first or second position of codon 12 of the c‐Ha‐ras gene were prepared, and the nucleotides inserted opposite the modified base were compared. The Klenow fragment (KF) of Escherichia coli DNA polymerase I inserted C opposite oh(8)Gua at both positions. Taq DNA polymerase incorporated C and A opposite oh(8)Gua, and the ratio of C to A was higher at the first position than at the second position. DNA polymerase α (pol α) inserted A and C at the first position, and A at the second position of codon 12, indicating that the ratio of C to A was higher at the first position. Moreover, we studied the extensions of bases paired with oh(8)Gua by DNA polymerases with or without 3′‐5’exonuclease activity. G and T opposite oh(8)Gua were removed, and subsequently C was inserted by KF. We found that an oh(8)Gua:A pair was recognized by the exonuclease activity of the enzyme and that A was partially subsituted by C. On the other hand, pol α extended only C and A opposite oh(8)Gua. No difference was observed with oh(8)Gua at the two positions. These results indicate that the ratio of nucleotides incorporated opposite oh(8)Gua depends on the sequence context, while there is no particular difference in the extension of base pairs involving oh(8)Gua by DNA polymerases. Blackwell Publishing Ltd 1995-03 /pmc/articles/PMC5920815/ /pubmed/7744697 http://dx.doi.org/10.1111/j.1349-7006.1995.tb03050.x Text en
spellingShingle Article
Kamiya, Hiroyuki
Murata‐Kamiya, Naoko
Fujimuro, Masahiro
Kido, Kaori
Inoue, Hideo
Nishimura, Susumu
Masutani, Chikahide
Hanaoka, Fumio
Ohtsuka, Eiko
Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title_full Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title_fullStr Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title_full_unstemmed Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title_short Comparison of Incorporation and Extension of Nucleotides in vitro opposite 8‐Hydroxyguanine (7,8‐Dihydro‐8‐oxoguanine) in Hot Spots of the c‐Ha‐ras Gene
title_sort comparison of incorporation and extension of nucleotides in vitro opposite 8‐hydroxyguanine (7,8‐dihydro‐8‐oxoguanine) in hot spots of the c‐ha‐ras gene
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5920815/
https://www.ncbi.nlm.nih.gov/pubmed/7744697
http://dx.doi.org/10.1111/j.1349-7006.1995.tb03050.x
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