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Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty
Frailty is a complex aging phenotype associated with increased vulnerability to disability and death. Understanding the biological antecedents of frailty may provide clues to healthy aging. The genome-wide association study hotspot, 9p21-23 region, is a risk locus for a number of age-related complex...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938407/ https://www.ncbi.nlm.nih.gov/pubmed/29765957 http://dx.doi.org/10.3389/fmed.2018.00105 |
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author | Sathyan, Sanish Barzilai, Nir Atzmon, Gil Milman, Sofiya Ayers, Emmeline Verghese, Joe |
author_facet | Sathyan, Sanish Barzilai, Nir Atzmon, Gil Milman, Sofiya Ayers, Emmeline Verghese, Joe |
author_sort | Sathyan, Sanish |
collection | PubMed |
description | Frailty is a complex aging phenotype associated with increased vulnerability to disability and death. Understanding the biological antecedents of frailty may provide clues to healthy aging. The genome-wide association study hotspot, 9p21-23 region, is a risk locus for a number of age-related complex disorders associated with frailty. Hence, we conducted an association study to examine whether variations in 9p21-23 locus plays a role in the pathogenesis of frailty in 637 community-dwelling Ashkenazi Jewish adults aged 65 and older enrolled in the LonGenity study. The strongest association with frailty (adjusted for age and gender) was found with the SNP rs518054 (odds ratio: 1.635, 95% CI = 1.241–2.154; p-value: 4.81 × 10(−04)) intergenic and located between LOC105375977 and C9orf146. The prevalence of four SNPs (rs1324192, rs7019262, rs518054, and rs571221) risk alleles haplotype in this region was significantly higher (compared with other haplotypes) in frail older adults compared with non-frail older adults (29.7 vs. 20.8%, p = 0.0005, respectively). Functional analyses using in silico approaches placed rs518054 in the CTCF binding site as well as DNase hypersensitive region. Furthermore, rs518054 was found to be in an enhancer site of NFIB gene located downstream. NFIB is a transcription factor that promotes cell differentiation during development, has antiapoptotic effect, maintains stem cell populations in adult tissues, and also acts as epigenetic regulators. Our study found novel association of SNPs in the regulatory region in the 9p21-23 region with the frailty phenotype; signifying the importance of this locus in aging. |
format | Online Article Text |
id | pubmed-5938407 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-59384072018-05-14 Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty Sathyan, Sanish Barzilai, Nir Atzmon, Gil Milman, Sofiya Ayers, Emmeline Verghese, Joe Front Med (Lausanne) Medicine Frailty is a complex aging phenotype associated with increased vulnerability to disability and death. Understanding the biological antecedents of frailty may provide clues to healthy aging. The genome-wide association study hotspot, 9p21-23 region, is a risk locus for a number of age-related complex disorders associated with frailty. Hence, we conducted an association study to examine whether variations in 9p21-23 locus plays a role in the pathogenesis of frailty in 637 community-dwelling Ashkenazi Jewish adults aged 65 and older enrolled in the LonGenity study. The strongest association with frailty (adjusted for age and gender) was found with the SNP rs518054 (odds ratio: 1.635, 95% CI = 1.241–2.154; p-value: 4.81 × 10(−04)) intergenic and located between LOC105375977 and C9orf146. The prevalence of four SNPs (rs1324192, rs7019262, rs518054, and rs571221) risk alleles haplotype in this region was significantly higher (compared with other haplotypes) in frail older adults compared with non-frail older adults (29.7 vs. 20.8%, p = 0.0005, respectively). Functional analyses using in silico approaches placed rs518054 in the CTCF binding site as well as DNase hypersensitive region. Furthermore, rs518054 was found to be in an enhancer site of NFIB gene located downstream. NFIB is a transcription factor that promotes cell differentiation during development, has antiapoptotic effect, maintains stem cell populations in adult tissues, and also acts as epigenetic regulators. Our study found novel association of SNPs in the regulatory region in the 9p21-23 region with the frailty phenotype; signifying the importance of this locus in aging. Frontiers Media S.A. 2018-05-01 /pmc/articles/PMC5938407/ /pubmed/29765957 http://dx.doi.org/10.3389/fmed.2018.00105 Text en Copyright © 2018 Sathyan, Barzilai, Atzmon, Milman, Ayers and Verghese. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Sathyan, Sanish Barzilai, Nir Atzmon, Gil Milman, Sofiya Ayers, Emmeline Verghese, Joe Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title | Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title_full | Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title_fullStr | Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title_full_unstemmed | Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title_short | Genetic Insights Into Frailty: Association of 9p21-23 Locus With Frailty |
title_sort | genetic insights into frailty: association of 9p21-23 locus with frailty |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938407/ https://www.ncbi.nlm.nih.gov/pubmed/29765957 http://dx.doi.org/10.3389/fmed.2018.00105 |
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