Prediction of protein-DNA interactions of transcription factors linking proteomics and transcriptomics data

We compared positional weight matrix-based prediction methods for transcription factor (TF) binding sites using selected fraction of ChIP-seq data with the help of partial AUC measure (limited to false positive rate 0.1, that is the most relevant for the application of the TF search in the genome sc...

Descripción completa

Detalles Bibliográficos
Autores principales: Kondrakhin, Yu., Valeev, T., Sharipov, R., Yevshin, I., Kolpakov, F., Kel, A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Regular Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988505/
https://www.ncbi.nlm.nih.gov/pubmed/29900118
http://dx.doi.org/10.1016/j.euprot.2016.09.001

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988505/
https://www.ncbi.nlm.nih.gov/pubmed/29900118
http://dx.doi.org/10.1016/j.euprot.2016.09.001

Ejemplares similares