Cargando…
Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays
High throughput screening (HTS) programs have demonstrated that the Vitamin D receptor (VDR) is activated and/or antagonized by a wide range of structurally diverse chemicals. In this study, we examined the Tox21 qHTS data set generated against VDR for reproducibility and concordance and elucidated...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995905/ https://www.ncbi.nlm.nih.gov/pubmed/29891985 http://dx.doi.org/10.1038/s41598-018-27055-3 |
_version_ | 1783330701680050176 |
---|---|
author | Mahapatra, Debabrata Franzosa, Jill A. Roell, Kyle Kuenemann, Melaine Agnes Houck, Keith A. Reif, David M. Fourches, Denis Kullman, Seth W. |
author_facet | Mahapatra, Debabrata Franzosa, Jill A. Roell, Kyle Kuenemann, Melaine Agnes Houck, Keith A. Reif, David M. Fourches, Denis Kullman, Seth W. |
author_sort | Mahapatra, Debabrata |
collection | PubMed |
description | High throughput screening (HTS) programs have demonstrated that the Vitamin D receptor (VDR) is activated and/or antagonized by a wide range of structurally diverse chemicals. In this study, we examined the Tox21 qHTS data set generated against VDR for reproducibility and concordance and elucidated functional insights into VDR-xenobiotic interactions. Twenty-one potential VDR agonists and 19 VDR antagonists were identified from a subset of >400 compounds with putative VDR activity and examined for VDR functionality utilizing select orthogonal assays. Transient transactivation assay (TT) using a human VDR plasmid and Cyp24 luciferase reporter construct revealed 20/21 active VDR agonists and 18/19 active VDR antagonists. Mammalian-2-hybrid assay (M2H) was then used to evaluate VDR interactions with co-activators and co-regulators. With the exception of a select few compounds, VDR agonists exhibited significant recruitment of co-regulators and co-activators whereas antagonists exhibited considerable attenuation of recruitment by VDR. A unique set of compounds exhibiting synergistic activity in antagonist mode and no activity in agonist mode was identified. Cheminformatics modeling of VDR-ligand interactions were conducted and revealed selective ligand VDR interaction. Overall, data emphasizes the molecular complexity of ligand-mediated interactions with VDR and suggest that VDR transactivation may be a target site of action for diverse xenobiotics. |
format | Online Article Text |
id | pubmed-5995905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-59959052018-06-21 Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays Mahapatra, Debabrata Franzosa, Jill A. Roell, Kyle Kuenemann, Melaine Agnes Houck, Keith A. Reif, David M. Fourches, Denis Kullman, Seth W. Sci Rep Article High throughput screening (HTS) programs have demonstrated that the Vitamin D receptor (VDR) is activated and/or antagonized by a wide range of structurally diverse chemicals. In this study, we examined the Tox21 qHTS data set generated against VDR for reproducibility and concordance and elucidated functional insights into VDR-xenobiotic interactions. Twenty-one potential VDR agonists and 19 VDR antagonists were identified from a subset of >400 compounds with putative VDR activity and examined for VDR functionality utilizing select orthogonal assays. Transient transactivation assay (TT) using a human VDR plasmid and Cyp24 luciferase reporter construct revealed 20/21 active VDR agonists and 18/19 active VDR antagonists. Mammalian-2-hybrid assay (M2H) was then used to evaluate VDR interactions with co-activators and co-regulators. With the exception of a select few compounds, VDR agonists exhibited significant recruitment of co-regulators and co-activators whereas antagonists exhibited considerable attenuation of recruitment by VDR. A unique set of compounds exhibiting synergistic activity in antagonist mode and no activity in agonist mode was identified. Cheminformatics modeling of VDR-ligand interactions were conducted and revealed selective ligand VDR interaction. Overall, data emphasizes the molecular complexity of ligand-mediated interactions with VDR and suggest that VDR transactivation may be a target site of action for diverse xenobiotics. Nature Publishing Group UK 2018-06-11 /pmc/articles/PMC5995905/ /pubmed/29891985 http://dx.doi.org/10.1038/s41598-018-27055-3 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Mahapatra, Debabrata Franzosa, Jill A. Roell, Kyle Kuenemann, Melaine Agnes Houck, Keith A. Reif, David M. Fourches, Denis Kullman, Seth W. Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title | Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title_full | Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title_fullStr | Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title_full_unstemmed | Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title_short | Confirmation of high-throughput screening data and novel mechanistic insights into VDR-xenobiotic interactions by orthogonal assays |
title_sort | confirmation of high-throughput screening data and novel mechanistic insights into vdr-xenobiotic interactions by orthogonal assays |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995905/ https://www.ncbi.nlm.nih.gov/pubmed/29891985 http://dx.doi.org/10.1038/s41598-018-27055-3 |
work_keys_str_mv | AT mahapatradebabrata confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT franzosajilla confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT roellkyle confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT kuenemannmelaineagnes confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT houckkeitha confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT reifdavidm confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT fourchesdenis confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays AT kullmansethw confirmationofhighthroughputscreeningdataandnovelmechanisticinsightsintovdrxenobioticinteractionsbyorthogonalassays |