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Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles

We assessed the applicability of giant unilamellar vesicles (GUVs) for RNA detection using in vesicle reverse transcription polymerase chain reaction (RT-PCR). We prepared GUVs that encapsulated one-pot RT-PCR reaction mixture including template RNA, primers, and Taqman probe, using water-in-oil emu...

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Autores principales: Tsugane, Mamiko, Suzuki, Hiroaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003926/
https://www.ncbi.nlm.nih.gov/pubmed/29907779
http://dx.doi.org/10.1038/s41598-018-27547-2
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author Tsugane, Mamiko
Suzuki, Hiroaki
author_facet Tsugane, Mamiko
Suzuki, Hiroaki
author_sort Tsugane, Mamiko
collection PubMed
description We assessed the applicability of giant unilamellar vesicles (GUVs) for RNA detection using in vesicle reverse transcription polymerase chain reaction (RT-PCR). We prepared GUVs that encapsulated one-pot RT-PCR reaction mixture including template RNA, primers, and Taqman probe, using water-in-oil emulsion transfer method. After thermal cycling, we analysed the GUVs that exhibited intense fluorescence signals, which represented the cDNA amplification. The detailed analysis of flow cytometry data demonstrated that rRNA and mRNA in the total RNA can be amplified from 10–100 copies in the GUVs with 5–10 μm diameter, although the fraction of reactable GUV was approximately 60% at most. Moreover, we report that the target RNA, which was directly transferred into the GUV reactors via membrane fusion, can be amplified and detected using in vesicle RT-PCR. These results suggest that the GUVs can be used as biomimetic reactors capable of performing PCR and RT-PCR, which are important in analytical and diagnostic applications with additional functions.
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spelling pubmed-60039262018-06-26 Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles Tsugane, Mamiko Suzuki, Hiroaki Sci Rep Article We assessed the applicability of giant unilamellar vesicles (GUVs) for RNA detection using in vesicle reverse transcription polymerase chain reaction (RT-PCR). We prepared GUVs that encapsulated one-pot RT-PCR reaction mixture including template RNA, primers, and Taqman probe, using water-in-oil emulsion transfer method. After thermal cycling, we analysed the GUVs that exhibited intense fluorescence signals, which represented the cDNA amplification. The detailed analysis of flow cytometry data demonstrated that rRNA and mRNA in the total RNA can be amplified from 10–100 copies in the GUVs with 5–10 μm diameter, although the fraction of reactable GUV was approximately 60% at most. Moreover, we report that the target RNA, which was directly transferred into the GUV reactors via membrane fusion, can be amplified and detected using in vesicle RT-PCR. These results suggest that the GUVs can be used as biomimetic reactors capable of performing PCR and RT-PCR, which are important in analytical and diagnostic applications with additional functions. Nature Publishing Group UK 2018-06-15 /pmc/articles/PMC6003926/ /pubmed/29907779 http://dx.doi.org/10.1038/s41598-018-27547-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Tsugane, Mamiko
Suzuki, Hiroaki
Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title_full Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title_fullStr Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title_full_unstemmed Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title_short Reverse Transcription Polymerase Chain Reaction in Giant Unilamellar Vesicles
title_sort reverse transcription polymerase chain reaction in giant unilamellar vesicles
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003926/
https://www.ncbi.nlm.nih.gov/pubmed/29907779
http://dx.doi.org/10.1038/s41598-018-27547-2
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