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Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
The [Ru(phen)(2)(dppz)](2+) complex (1) is non-emissive in water but is highly luminescent in organic solvents or when bound to DNA, making it a useful probe for DNA binding. To date, a complete mechanistic explanation for this “light-switch” effect is still lacking. With this in mind we have undert...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6005197/ https://www.ncbi.nlm.nih.gov/pubmed/29997799 http://dx.doi.org/10.1039/c5sc04514b |
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author | Poynton, Fergus E. Hall, James P. Keane, Páraic M. Schwarz, Christine Sazanovich, Igor V. Towrie, Michael Gunnlaugsson, Thorfinnur Cardin, Christine J. Cardin, David J. Quinn, Susan J. Long, Conor Kelly, John M. |
author_facet | Poynton, Fergus E. Hall, James P. Keane, Páraic M. Schwarz, Christine Sazanovich, Igor V. Towrie, Michael Gunnlaugsson, Thorfinnur Cardin, Christine J. Cardin, David J. Quinn, Susan J. Long, Conor Kelly, John M. |
author_sort | Poynton, Fergus E. |
collection | PubMed |
description | The [Ru(phen)(2)(dppz)](2+) complex (1) is non-emissive in water but is highly luminescent in organic solvents or when bound to DNA, making it a useful probe for DNA binding. To date, a complete mechanistic explanation for this “light-switch” effect is still lacking. With this in mind we have undertaken an ultrafast time resolved infrared (TRIR) study of 1 and directly observe marker bands between 1280–1450 cm(–1), which characterise both the emissive “bright” and the non-emissive “dark” excited states of the complex, in CD(3)CN and D(2)O respectively. These characteristic spectral features are present in the [Ru(dppz)(3)](2+) solvent light-switch complex but absent in [Ru(phen)(3)](2+), which is luminescent in both solvents. DFT calculations show that the vibrational modes responsible for these characteristic bands are predominantly localised on the dppz ligand. Moreover, they reveal that certain vibrational modes of the “dark” excited state couple with vibrational modes of two coordinating water molecules, and through these to the bulk solvent, thus providing a new insight into the mechanism of the light-switch effect. We also demonstrate that the marker bands for the “bright” state are observed for both Λ- and Δ-enantiomers of 1 when bound to DNA and that photo-excitation of the complex induces perturbation of the guanine and cytosine carbonyl bands. This perturbation is shown to be stronger for the Λ-enantiomer, demonstrating the different binding site properties of the two enantiomers and the ability of this technique to determine the identity and nature of the binding site of such intercalators. |
format | Online Article Text |
id | pubmed-6005197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-60051972018-07-11 Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA Poynton, Fergus E. Hall, James P. Keane, Páraic M. Schwarz, Christine Sazanovich, Igor V. Towrie, Michael Gunnlaugsson, Thorfinnur Cardin, Christine J. Cardin, David J. Quinn, Susan J. Long, Conor Kelly, John M. Chem Sci Chemistry The [Ru(phen)(2)(dppz)](2+) complex (1) is non-emissive in water but is highly luminescent in organic solvents or when bound to DNA, making it a useful probe for DNA binding. To date, a complete mechanistic explanation for this “light-switch” effect is still lacking. With this in mind we have undertaken an ultrafast time resolved infrared (TRIR) study of 1 and directly observe marker bands between 1280–1450 cm(–1), which characterise both the emissive “bright” and the non-emissive “dark” excited states of the complex, in CD(3)CN and D(2)O respectively. These characteristic spectral features are present in the [Ru(dppz)(3)](2+) solvent light-switch complex but absent in [Ru(phen)(3)](2+), which is luminescent in both solvents. DFT calculations show that the vibrational modes responsible for these characteristic bands are predominantly localised on the dppz ligand. Moreover, they reveal that certain vibrational modes of the “dark” excited state couple with vibrational modes of two coordinating water molecules, and through these to the bulk solvent, thus providing a new insight into the mechanism of the light-switch effect. We also demonstrate that the marker bands for the “bright” state are observed for both Λ- and Δ-enantiomers of 1 when bound to DNA and that photo-excitation of the complex induces perturbation of the guanine and cytosine carbonyl bands. This perturbation is shown to be stronger for the Λ-enantiomer, demonstrating the different binding site properties of the two enantiomers and the ability of this technique to determine the identity and nature of the binding site of such intercalators. Royal Society of Chemistry 2016-05-01 2016-01-27 /pmc/articles/PMC6005197/ /pubmed/29997799 http://dx.doi.org/10.1039/c5sc04514b Text en This journal is © The Royal Society of Chemistry 2016 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0) |
spellingShingle | Chemistry Poynton, Fergus E. Hall, James P. Keane, Páraic M. Schwarz, Christine Sazanovich, Igor V. Towrie, Michael Gunnlaugsson, Thorfinnur Cardin, Christine J. Cardin, David J. Quinn, Susan J. Long, Conor Kelly, John M. Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA |
title | Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
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title_full | Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
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title_fullStr | Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
|
title_full_unstemmed | Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
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title_short | Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to DNA
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title_sort | direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [ru(phen)(2)(dppz)](2+) light-switch compound in solution and when bound to dna |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6005197/ https://www.ncbi.nlm.nih.gov/pubmed/29997799 http://dx.doi.org/10.1039/c5sc04514b |
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