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SamSelect: a sample sequence selection algorithm for quorum planted motif search on large DNA datasets
BACKGROUND: Given a set of t n-length DNA sequences, q satisfying 0 < q ≤ 1, and l and d satisfying 0 ≤ d < l < n, the quorum planted motif search (qPMS) finds l-length strings that occur in at least qt input sequences with up to d mismatches and is mainly used to locate transcription facto...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2018
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006848/ https://www.ncbi.nlm.nih.gov/pubmed/29914360 http://dx.doi.org/10.1186/s12859-018-2242-y |