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SNPrune: an efficient algorithm to prune large SNP array and sequence datasets based on high linkage disequilibrium
BACKGROUND: High levels of pairwise linkage disequilibrium (LD) in single nucleotide polymorphism (SNP) array or whole-genome sequence data may affect both performance and efficiency of genomic prediction models. Thus, this warrants pruning of genotyping data for high LD. We developed an algorithm,...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2018
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6019535/ https://www.ncbi.nlm.nih.gov/pubmed/29940846 http://dx.doi.org/10.1186/s12711-018-0404-z |