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A space and time-efficient index for the compacted colored de Bruijn graph
MOTIVATION: Indexing reference sequences for search—both individual genomes and collections of genomes—is an important building block for many sequence analysis tasks. Much work has been dedicated to developing full-text indices for genomic sequences, based on data structures such as the suffix arra...
Autores principales: | Almodaresi, Fatemeh, Sarkar, Hirak, Srivastava, Avi, Patro, Rob |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6022659/ https://www.ncbi.nlm.nih.gov/pubmed/29949982 http://dx.doi.org/10.1093/bioinformatics/bty292 |
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