MicroPheno: predicting environments and host phenotypes from 16S rRNA gene sequencing using a k-mer based representation of shallow sub-samples

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MOTIVATION: Microbial communities play important roles in the function and maintenance of various biosystems, ranging from the human body to the environment. A major challenge in microbiome research is the classification of microbial communities of different environments or host phenotypes. The most...

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Detalles Bibliográficos
Autores principales: Asgari, Ehsaneddin, Garakani, Kiavash, McHardy, Alice C, Mofrad, Mohammad R K
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Ismb 2018–Intelligent Systems for Molecular Biology Proceedings
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6022683/
https://www.ncbi.nlm.nih.gov/pubmed/29950008
http://dx.doi.org/10.1093/bioinformatics/bty296

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6022683/
https://www.ncbi.nlm.nih.gov/pubmed/29950008
http://dx.doi.org/10.1093/bioinformatics/bty296

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