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Identification of a tyrosine switch in copper-haem nitrite reductases

There are few cases where tyrosine has been shown to be involved in catalysis or the control of catalysis despite its ability to carry out chemistry at much higher potentials (1 V versus NHE). Here, it is shown that a tyrosine that blocks the hydrophobic substrate-entry channel in copper-haem nitrit...

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Autores principales: Dong, Jianshu, Sasaki, Daisuke, Eady, Robert R., Antonyuk, Svetlana V., Hasnain, S. Samar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038957/
https://www.ncbi.nlm.nih.gov/pubmed/30002851
http://dx.doi.org/10.1107/S2052252518008242
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author Dong, Jianshu
Sasaki, Daisuke
Eady, Robert R.
Antonyuk, Svetlana V.
Hasnain, S. Samar
author_facet Dong, Jianshu
Sasaki, Daisuke
Eady, Robert R.
Antonyuk, Svetlana V.
Hasnain, S. Samar
author_sort Dong, Jianshu
collection PubMed
description There are few cases where tyrosine has been shown to be involved in catalysis or the control of catalysis despite its ability to carry out chemistry at much higher potentials (1 V versus NHE). Here, it is shown that a tyrosine that blocks the hydrophobic substrate-entry channel in copper-haem nitrite reductases can be activated like a switch by the treatment of crystals of Ralstonia pickettii nitrite reductase (RpNiR) with nitric oxide (NO) (−0.8 ± 0.2 V). Treatment with NO results in an opening of the channel originating from the rotation of Tyr323 away from Asp(CAT)97. Remarkably, the structure of a catalytic copper-deficient enzyme also shows Tyr323 in the closed position despite the absence of type 2 copper (T2Cu), clearly demonstrating that the status of Tyr323 is not controlled by T2Cu or its redox chemistry. It is also shown that the activation by NO is not through binding to haem. It is proposed that activation of the Tyr323 switch is controlled by NO through proton abstraction from tyrosine and the formation of HNO. The insight gained here for the use of tyrosine as a switch in catalysis has wider implications for catalysis in biology.
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spelling pubmed-60389572018-07-12 Identification of a tyrosine switch in copper-haem nitrite reductases Dong, Jianshu Sasaki, Daisuke Eady, Robert R. Antonyuk, Svetlana V. Hasnain, S. Samar IUCrJ Research Papers There are few cases where tyrosine has been shown to be involved in catalysis or the control of catalysis despite its ability to carry out chemistry at much higher potentials (1 V versus NHE). Here, it is shown that a tyrosine that blocks the hydrophobic substrate-entry channel in copper-haem nitrite reductases can be activated like a switch by the treatment of crystals of Ralstonia pickettii nitrite reductase (RpNiR) with nitric oxide (NO) (−0.8 ± 0.2 V). Treatment with NO results in an opening of the channel originating from the rotation of Tyr323 away from Asp(CAT)97. Remarkably, the structure of a catalytic copper-deficient enzyme also shows Tyr323 in the closed position despite the absence of type 2 copper (T2Cu), clearly demonstrating that the status of Tyr323 is not controlled by T2Cu or its redox chemistry. It is also shown that the activation by NO is not through binding to haem. It is proposed that activation of the Tyr323 switch is controlled by NO through proton abstraction from tyrosine and the formation of HNO. The insight gained here for the use of tyrosine as a switch in catalysis has wider implications for catalysis in biology. International Union of Crystallography 2018-06-25 /pmc/articles/PMC6038957/ /pubmed/30002851 http://dx.doi.org/10.1107/S2052252518008242 Text en © Dong et al. 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Papers
Dong, Jianshu
Sasaki, Daisuke
Eady, Robert R.
Antonyuk, Svetlana V.
Hasnain, S. Samar
Identification of a tyrosine switch in copper-haem nitrite reductases
title Identification of a tyrosine switch in copper-haem nitrite reductases
title_full Identification of a tyrosine switch in copper-haem nitrite reductases
title_fullStr Identification of a tyrosine switch in copper-haem nitrite reductases
title_full_unstemmed Identification of a tyrosine switch in copper-haem nitrite reductases
title_short Identification of a tyrosine switch in copper-haem nitrite reductases
title_sort identification of a tyrosine switch in copper-haem nitrite reductases
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038957/
https://www.ncbi.nlm.nih.gov/pubmed/30002851
http://dx.doi.org/10.1107/S2052252518008242
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