STAble: a novel approach to de novo assembly of RNA-seq data and its application in a metabolic model network based metatranscriptomic workflow

BACKGROUND: De novo assembly of RNA-seq data allows the study of transcriptome in absence of a reference genome either if data is obtained from a single organism or from a mixed sample as in metatranscriptomics studies. Given the high number of sequences obtained from NGS approaches, a critical step...

Descripción completa

Detalles Bibliográficos
Autores principales: Saggese, Igor, Bona, Elisa, Conway, Max, Favero, Francesco, Ladetto, Marco, Liò, Pietro, Manzini, Giovanni, Mignone, Flavio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6069750/
https://www.ncbi.nlm.nih.gov/pubmed/30066630
http://dx.doi.org/10.1186/s12859-018-2174-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6069750/
https://www.ncbi.nlm.nih.gov/pubmed/30066630
http://dx.doi.org/10.1186/s12859-018-2174-6

Ejemplares similares