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Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism

Adenosine Kinase (ADK) regulates the cellular levels of adenosine (ADO) by fine-tuning its metabolic clearance. The transfer of γ-phosphate from ATP to ADO by ADK involves regulation by the substrates and products, as well as by Mg(2+) and inorganic phosphate. Here we present new crystal structures...

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Autores principales: de Oliveira, Renata Rocha, Morales-Neto, Raphael, Rocco, Silvana Aparecida, Sforça, Maurício Luis, Polo, Carla Cristina, Tonoli, Celisa Caldana Costa, Mercaldi, Gustavo Fernando, Cordeiro, Artur Torres, Murakami, Mário Tyago, Franchini, Kleber Gomes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086891/
https://www.ncbi.nlm.nih.gov/pubmed/30097648
http://dx.doi.org/10.1038/s41598-018-30418-5
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author de Oliveira, Renata Rocha
Morales-Neto, Raphael
Rocco, Silvana Aparecida
Sforça, Maurício Luis
Polo, Carla Cristina
Tonoli, Celisa Caldana Costa
Mercaldi, Gustavo Fernando
Cordeiro, Artur Torres
Murakami, Mário Tyago
Franchini, Kleber Gomes
author_facet de Oliveira, Renata Rocha
Morales-Neto, Raphael
Rocco, Silvana Aparecida
Sforça, Maurício Luis
Polo, Carla Cristina
Tonoli, Celisa Caldana Costa
Mercaldi, Gustavo Fernando
Cordeiro, Artur Torres
Murakami, Mário Tyago
Franchini, Kleber Gomes
author_sort de Oliveira, Renata Rocha
collection PubMed
description Adenosine Kinase (ADK) regulates the cellular levels of adenosine (ADO) by fine-tuning its metabolic clearance. The transfer of γ-phosphate from ATP to ADO by ADK involves regulation by the substrates and products, as well as by Mg(2+) and inorganic phosphate. Here we present new crystal structures of mouse ADK (mADK) binary (mADK:ADO; 1.2 Å) and ternary (mADK:ADO:ADP; 1.8 Å) complexes. In accordance with the structural demonstration of ADO occupancy of the ATP binding site, kinetic studies confirmed a competitive model of auto-inhibition of ADK by ADO. In the ternary complex, a K(+) ion is hexacoordinated between loops adjacent to the ATP binding site, where Asp310 connects the K(+) coordination sphere to the ATP binding site through an anion hole structure. Nuclear Magnetic Resonance 2D (15)N-(1)H HSQC experiments revealed that the binding of K(+) perturbs Asp310 and residues of adjacent helices 14 and 15, engaging a transition to a catalytically productive structure. Consistent with the structural data, the mutants D310A and D310P are catalytically deficient and loose responsiveness to K(+). Saturation Transfer Difference spectra of ATPγS provided evidence for an unfavorable interaction of the mADK D310P mutant for ATP. Reductions in K(+) concentration diminish, whereas increases enhance the in vitro activity of mADK (maximum of 2.5-fold; apparent K(d) = 10.4 mM). Mechanistically, K(+) increases the catalytic turnover (K(cat)) but does not affect the affinity of mADK for ADO or ATP. Depletion of intracellular K(+) inhibited, while its restoration was accompanied by a full recovery of cellular ADK activity. Together, this novel dataset reveals the molecular basis of the allosteric activation of ADK by K(+) and highlights the role of ADK in connecting depletion of intracellular K(+) to the regulation of purine metabolism.
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spelling pubmed-60868912018-08-16 Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism de Oliveira, Renata Rocha Morales-Neto, Raphael Rocco, Silvana Aparecida Sforça, Maurício Luis Polo, Carla Cristina Tonoli, Celisa Caldana Costa Mercaldi, Gustavo Fernando Cordeiro, Artur Torres Murakami, Mário Tyago Franchini, Kleber Gomes Sci Rep Article Adenosine Kinase (ADK) regulates the cellular levels of adenosine (ADO) by fine-tuning its metabolic clearance. The transfer of γ-phosphate from ATP to ADO by ADK involves regulation by the substrates and products, as well as by Mg(2+) and inorganic phosphate. Here we present new crystal structures of mouse ADK (mADK) binary (mADK:ADO; 1.2 Å) and ternary (mADK:ADO:ADP; 1.8 Å) complexes. In accordance with the structural demonstration of ADO occupancy of the ATP binding site, kinetic studies confirmed a competitive model of auto-inhibition of ADK by ADO. In the ternary complex, a K(+) ion is hexacoordinated between loops adjacent to the ATP binding site, where Asp310 connects the K(+) coordination sphere to the ATP binding site through an anion hole structure. Nuclear Magnetic Resonance 2D (15)N-(1)H HSQC experiments revealed that the binding of K(+) perturbs Asp310 and residues of adjacent helices 14 and 15, engaging a transition to a catalytically productive structure. Consistent with the structural data, the mutants D310A and D310P are catalytically deficient and loose responsiveness to K(+). Saturation Transfer Difference spectra of ATPγS provided evidence for an unfavorable interaction of the mADK D310P mutant for ATP. Reductions in K(+) concentration diminish, whereas increases enhance the in vitro activity of mADK (maximum of 2.5-fold; apparent K(d) = 10.4 mM). Mechanistically, K(+) increases the catalytic turnover (K(cat)) but does not affect the affinity of mADK for ADO or ATP. Depletion of intracellular K(+) inhibited, while its restoration was accompanied by a full recovery of cellular ADK activity. Together, this novel dataset reveals the molecular basis of the allosteric activation of ADK by K(+) and highlights the role of ADK in connecting depletion of intracellular K(+) to the regulation of purine metabolism. Nature Publishing Group UK 2018-08-10 /pmc/articles/PMC6086891/ /pubmed/30097648 http://dx.doi.org/10.1038/s41598-018-30418-5 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
de Oliveira, Renata Rocha
Morales-Neto, Raphael
Rocco, Silvana Aparecida
Sforça, Maurício Luis
Polo, Carla Cristina
Tonoli, Celisa Caldana Costa
Mercaldi, Gustavo Fernando
Cordeiro, Artur Torres
Murakami, Mário Tyago
Franchini, Kleber Gomes
Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title_full Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title_fullStr Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title_full_unstemmed Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title_short Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism
title_sort adenosine kinase couples sensing of cellular potassium depletion to purine metabolism
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086891/
https://www.ncbi.nlm.nih.gov/pubmed/30097648
http://dx.doi.org/10.1038/s41598-018-30418-5
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