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Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand

Production of the translation apparatus of E. coli is carefully matched to the demand for protein synthesis posed by a given growth condition. For example, the fraction of RNA polymerases that transcribe rRNA and tRNA drops from 80% during rapid growth to 24% within minutes of a sudden amino acid st...

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Detalles Bibliográficos
Autores principales: Sørensen, Michael Askvad, Fehler, Annaleigh Ohrt, Lo Svenningsen, Sine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6103710/
https://www.ncbi.nlm.nih.gov/pubmed/29023189
http://dx.doi.org/10.1080/15476286.2017.1391440
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author Sørensen, Michael Askvad
Fehler, Annaleigh Ohrt
Lo Svenningsen, Sine
author_facet Sørensen, Michael Askvad
Fehler, Annaleigh Ohrt
Lo Svenningsen, Sine
author_sort Sørensen, Michael Askvad
collection PubMed
description Production of the translation apparatus of E. coli is carefully matched to the demand for protein synthesis posed by a given growth condition. For example, the fraction of RNA polymerases that transcribe rRNA and tRNA drops from 80% during rapid growth to 24% within minutes of a sudden amino acid starvation. We recently reported in Nucleic Acids Research that the tRNA pool is more dynamically regulated than previously thought. In addition to the regulation at the level of synthesis, we found that tRNAs are subject to demand-based regulation at the level of their degradation. In this point-of-view article we address the question of why this phenomenon has not previously been described. We also present data that expands on the mechanism of tRNA degradation, and we discuss the possible implications of tRNA instability for the ability of E. coli to cope with stresses that affect the translation process.
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spelling pubmed-61037102018-08-24 Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand Sørensen, Michael Askvad Fehler, Annaleigh Ohrt Lo Svenningsen, Sine RNA Biol Point of View Production of the translation apparatus of E. coli is carefully matched to the demand for protein synthesis posed by a given growth condition. For example, the fraction of RNA polymerases that transcribe rRNA and tRNA drops from 80% during rapid growth to 24% within minutes of a sudden amino acid starvation. We recently reported in Nucleic Acids Research that the tRNA pool is more dynamically regulated than previously thought. In addition to the regulation at the level of synthesis, we found that tRNAs are subject to demand-based regulation at the level of their degradation. In this point-of-view article we address the question of why this phenomenon has not previously been described. We also present data that expands on the mechanism of tRNA degradation, and we discuss the possible implications of tRNA instability for the ability of E. coli to cope with stresses that affect the translation process. Taylor & Francis 2018-05-09 /pmc/articles/PMC6103710/ /pubmed/29023189 http://dx.doi.org/10.1080/15476286.2017.1391440 Text en © 2018 The Author(s). Published with license by Taylor & Francis Group, LLC http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.
spellingShingle Point of View
Sørensen, Michael Askvad
Fehler, Annaleigh Ohrt
Lo Svenningsen, Sine
Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title_full Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title_fullStr Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title_full_unstemmed Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title_short Transfer RNA instability as a stress response in Escherichia coli: Rapid dynamics of the tRNA pool as a function of demand
title_sort transfer rna instability as a stress response in escherichia coli: rapid dynamics of the trna pool as a function of demand
topic Point of View
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6103710/
https://www.ncbi.nlm.nih.gov/pubmed/29023189
http://dx.doi.org/10.1080/15476286.2017.1391440
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