TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution

Taxonomy assignment of freshwater microbial communities is limited by the minimally curated phylogenies used for large taxonomy databases. Here we introduce TaxAss, a taxonomy assignment workflow that classifies 16S rRNA gene amplicon data using two taxonomy reference databases: a large comprehensiv...

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Detalles Bibliográficos
Autores principales: Rohwer, Robin R., Hamilton, Joshua J., Newton, Ryan J., McMahon, Katherine D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6126143/
https://www.ncbi.nlm.nih.gov/pubmed/30185512
http://dx.doi.org/10.1128/mSphere.00327-18

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6126143/
https://www.ncbi.nlm.nih.gov/pubmed/30185512
http://dx.doi.org/10.1128/mSphere.00327-18

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