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Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase

Reverse gyrase is a topoisomerase that can introduce positive supercoils to its substrate DNA. It is demonstrated in our studies that a highly thermal stable G-quadruplex structure in a mini-plasmid DNA was transformed into its duplex conformation after a treatment with reverse gyrase. The structura...

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Detalles Bibliográficos
Autores principales: Li, Dawei, Wang, Qiang, Liu, Yun, Liu, Kun, Zhuge, Qiang, Lv, Bei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6150213/
https://www.ncbi.nlm.nih.gov/pubmed/29165328
http://dx.doi.org/10.3390/molecules22112021
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author Li, Dawei
Wang, Qiang
Liu, Yun
Liu, Kun
Zhuge, Qiang
Lv, Bei
author_facet Li, Dawei
Wang, Qiang
Liu, Yun
Liu, Kun
Zhuge, Qiang
Lv, Bei
author_sort Li, Dawei
collection PubMed
description Reverse gyrase is a topoisomerase that can introduce positive supercoils to its substrate DNA. It is demonstrated in our studies that a highly thermal stable G-quadruplex structure in a mini-plasmid DNA was transformed into its duplex conformation after a treatment with reverse gyrase. The structural difference of the topoisomers were verified and analyzed by gel electrophoresis, atomic force microscopy examination, and endonuclease digestion assays. All evidence suggested that the overwinding structure of positive supercoil could provide a driven force to disintegrate G-quadruplex and reform duplex. The results of our studies could suggest that hyperthermophiles might use reverse gyrase to manipulate the disintegration of non-B DNA structures and safekeep their genomic information.
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spelling pubmed-61502132018-11-13 Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase Li, Dawei Wang, Qiang Liu, Yun Liu, Kun Zhuge, Qiang Lv, Bei Molecules Article Reverse gyrase is a topoisomerase that can introduce positive supercoils to its substrate DNA. It is demonstrated in our studies that a highly thermal stable G-quadruplex structure in a mini-plasmid DNA was transformed into its duplex conformation after a treatment with reverse gyrase. The structural difference of the topoisomers were verified and analyzed by gel electrophoresis, atomic force microscopy examination, and endonuclease digestion assays. All evidence suggested that the overwinding structure of positive supercoil could provide a driven force to disintegrate G-quadruplex and reform duplex. The results of our studies could suggest that hyperthermophiles might use reverse gyrase to manipulate the disintegration of non-B DNA structures and safekeep their genomic information. MDPI 2017-11-22 /pmc/articles/PMC6150213/ /pubmed/29165328 http://dx.doi.org/10.3390/molecules22112021 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Dawei
Wang, Qiang
Liu, Yun
Liu, Kun
Zhuge, Qiang
Lv, Bei
Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title_full Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title_fullStr Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title_full_unstemmed Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title_short Transformation of a Thermostable G-Quadruplex Structure into DNA Duplex Driven by Reverse Gyrase
title_sort transformation of a thermostable g-quadruplex structure into dna duplex driven by reverse gyrase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6150213/
https://www.ncbi.nlm.nih.gov/pubmed/29165328
http://dx.doi.org/10.3390/molecules22112021
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