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Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System
Integrating quantitative systems pharmacology (QSP) into pharmacokinetics/pharmacodynamics (PKPD) has resulted in models that are highly complex and often not amenable to further exploration via estimation or design. Because QSP models are usually depicted using nonlinear differential equations it i...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6157701/ https://www.ncbi.nlm.nih.gov/pubmed/30043496 http://dx.doi.org/10.1002/psp4.12324 |
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author | Hasegawa, Chihiro Duffull, Stephen B. |
author_facet | Hasegawa, Chihiro Duffull, Stephen B. |
author_sort | Hasegawa, Chihiro |
collection | PubMed |
description | Integrating quantitative systems pharmacology (QSP) into pharmacokinetics/pharmacodynamics (PKPD) has resulted in models that are highly complex and often not amenable to further exploration via estimation or design. Because QSP models are usually depicted using nonlinear differential equations it is not straightforward to apply some model reduction techniques, such as proper lumping. In this study, we explore the combined use of linearization and proper lumping as a general method to simplification of a nonlinear QSP model. We illustrate this with a bone biology model and the reduced model was then applied to describe bone mineral density (BMD) changes due to denosumab dosing. The methodologies used in this study can be applied to other multiscale models for developing a mechanism‐based structural model for future analyses. |
format | Online Article Text |
id | pubmed-6157701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-61577012018-09-29 Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System Hasegawa, Chihiro Duffull, Stephen B. CPT Pharmacometrics Syst Pharmacol Research Integrating quantitative systems pharmacology (QSP) into pharmacokinetics/pharmacodynamics (PKPD) has resulted in models that are highly complex and often not amenable to further exploration via estimation or design. Because QSP models are usually depicted using nonlinear differential equations it is not straightforward to apply some model reduction techniques, such as proper lumping. In this study, we explore the combined use of linearization and proper lumping as a general method to simplification of a nonlinear QSP model. We illustrate this with a bone biology model and the reduced model was then applied to describe bone mineral density (BMD) changes due to denosumab dosing. The methodologies used in this study can be applied to other multiscale models for developing a mechanism‐based structural model for future analyses. John Wiley and Sons Inc. 2018-08-13 2018-09 /pmc/articles/PMC6157701/ /pubmed/30043496 http://dx.doi.org/10.1002/psp4.12324 Text en © 2018 The Authors CPT: Pharmacometrics & Systems Pharmacology published by Wiley Periodicals, Inc. on behalf of the American Society for Clinical Pharmacology and Therapeutics. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Hasegawa, Chihiro Duffull, Stephen B. Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title | Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title_full | Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title_fullStr | Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title_full_unstemmed | Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title_short | Automated Scale Reduction of Nonlinear QSP Models With an Illustrative Application to a Bone Biology System |
title_sort | automated scale reduction of nonlinear qsp models with an illustrative application to a bone biology system |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6157701/ https://www.ncbi.nlm.nih.gov/pubmed/30043496 http://dx.doi.org/10.1002/psp4.12324 |
work_keys_str_mv | AT hasegawachihiro automatedscalereductionofnonlinearqspmodelswithanillustrativeapplicationtoabonebiologysystem AT duffullstephenb automatedscalereductionofnonlinearqspmodelswithanillustrativeapplicationtoabonebiologysystem |