Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats

Generating a complete, de novo genome assembly for prokaryotes is often considered a solved problem. However, we here show that Pseudomonas koreensis P19E3 harbors multiple, near identical repeat pairs up to 70 kilobase pairs in length, which contained several genes that may confer fitness advantage...

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Detalles Bibliográficos
Autores principales: Schmid, Michael, Frei, Daniel, Patrignani, Andrea, Schlapbach, Ralph, Frey, Jürg E, Remus-Emsermann, Mitja N P, Ahrens, Christian H
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Genomics
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158609/
https://www.ncbi.nlm.nih.gov/pubmed/30137508
http://dx.doi.org/10.1093/nar/gky726

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158609/
https://www.ncbi.nlm.nih.gov/pubmed/30137508
http://dx.doi.org/10.1093/nar/gky726

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